DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ci and modSP

DIOPT Version :10

Sequence 1:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:246 Identity:55/246 - (22%)
Similarity:83/246 - (33%) Gaps:74/246 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CSALTVPHSLVHPRDLEIRHGGIEGRITNGNLASEGQVPYIVGVSL--NSNGNWWWCGGSIIGHT 77
            |..|..|          |:.....|...|..:     ||:.||:.:  |.....:.||||::...
  Fly   358 CGQLATP----------IKQFSSGGYTINNTV-----VPWHVGLYVWHNEKDYHFQCGGSLLTPD 407

  Fly    78 WVLTAAHCTAGADEASLYYGAVNYNEPAFRHTVSSENFIRY------------------PHYVGL 124
            .|:|||||.  .||.:    .:.|:...|| .::::.:..|                  |.|.|.
  Fly   408 LVITAAHCV--YDEGT----RLPYSYDTFR-VIAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGR 465

  Fly   125 D----HDLALI------KTPH------VDFYSLVNKIELPSLDDRYNSYENNWVQAAGWGAIYDG 173
            .    .||||:      :..|      |.|.|...|..:  .||....:       |||      
  Fly   466 TENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESV--TDDVQGKF-------AGW------ 515

  Fly   174 SNVVEDLRVVDLKVISVAECQAYYGTDTASENTICVETPDGKATCQGDSGG 224
             |:.....:..:..:|.:.............:..|:.|......|||||||
  Fly   516 -NIENKHELQFVPAVSKSNSVCRRNLRDIQADKFCIFTQGKSLACQGDSGG 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiNP_524555.1 Tryp_SPc 41..266 CDD:238113 50/220 (23%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 51/223 (23%)
Blue background indicates that the domain is not in the aligned region.

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