DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Ci and Klk1

DIOPT Version :10

Sequence 1:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036725.2 Gene:Klk1 / 24523 RGDID:2969 Length:261 Species:Rattus norvegicus


Alignment Length:267 Identity:81/267 - (30%)
Similarity:127/267 - (47%) Gaps:49/267 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LEIRHGGIEGRITNGNLASEGQVPYIVGVSLNSNGNWW----------WCGGSIIGHTWVLTAAH 84
            |::..|.|:.       |..||...|.|.....|...|          .|||.:|..:||:||||
  Rat     8 LDLSLGQIDA-------APPGQSRVIGGYKCEKNSQPWQVALYSFSKYLCGGVLIDPSWVITAAH 65

  Fly    85 CTAGADEASLYYGAVNYNEPAFRHTVSSENFIRYPHY-----------VGLDH--DLALIK-TPH 135
            |::...:..|....:..:||..:|.:.|::| .:|.|           .|.||  ||.|:. :..
  Rat    66 CSSNNYQVWLGRNNLLEDEPFAQHRLVSQSF-PHPDYKPFLMRNHTRKPGDDHSNDLMLLHLSQP 129

  Fly   136 VDFYSLVNKIELPSLDDRYNSYENNWVQAAGWGA----IYDGSNVVEDLRVVDLKVISVAEC-QA 195
            .|....|..|:||:.:.:..|    ...|:|||:    |::   ..:||:.|::.::|..:| :|
  Rat   130 ADITDGVKVIDLPTEEPKVGS----TCLASGWGSTKPLIWE---FPDDLQCVNIHLLSNEKCIKA 187

  Fly   196 YYGTDTASENTICV-ETPDGKATCQGDSGGPLVTKEGDKLIGITSFVSAYGCQVGGPAGFTRVTK 259
            |  .:..::..:|. |...||.||.|||||||:. :| .|.||||:.|....:...||.:|::.|
  Rat   188 Y--KEKVTDLMLCAGELEGGKDTCTGDSGGPLLC-DG-VLQGITSWGSVPCAKTNMPAIYTKLIK 248

  Fly   260 YLEWIKE 266
            :..||||
  Rat   249 FTSWIKE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiNP_524555.1 Tryp_SPc 41..266 CDD:238113 76/254 (30%)
Klk1NP_036725.2 Tryp_SPc 24..253 CDD:214473 71/240 (30%)

Return to query results.
Submit another query.