DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ci and svh-1

DIOPT Version :9

Sequence 1:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:255 Identity:72/255 - (28%)
Similarity:109/255 - (42%) Gaps:46/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NGNLASEGQVPYIVGVSLNSNGNWWW-------------CGGSIIGHTWVLTAAHCTAGADEASL 94
            |...|::.::..:||......|.:.|             ||.||:..|.::|||||....:..|.
 Worm   701 NARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSS 765

  Fly    95 YYGAV--------NYNEPAFRHTVSSENFIRYPHYVGL-DHDLALIKTPH--VDFYSLVNKIELP 148
            |...|        :.||..|  .:...:|  ||.|..: .||:|:::.|:  ::|......|.||
 Worm   766 YEVVVGDWDNNQTDGNEQIF--YLQRIHF--YPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLP 826

  Fly   149 SLDDRYNSYENNWVQAAGWGAIYDGSNVVEDLRVVDLKVISVAEC----QAYYGTDTASENTICV 209
            |.|..|.  .......:|||::  |....|.|:...:.:|:..:|    |.|   .:.|.:..|.
 Worm   827 SKDFVYT--PGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDCVNSSQIY---SSMSRSAFCA 884

  Fly   210 ETPDGKA-TCQGDSGGPLVTKEGD---KLIGITSFVSAYGC-QVGGPAGFTRVTKYLEWI 264
            ...:|.. :||||||||...:..|   .|.|:.|:  ..|| |...|..:|.|..||.||
 Worm   885 GYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISW--GDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiNP_524555.1 Tryp_SPc 40..264 CDD:214473 70/253 (28%)
Tryp_SPc 41..266 CDD:238113 72/255 (28%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 70/243 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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