DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ci and Gzmb

DIOPT Version :10

Sequence 1:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:235 Identity:69/235 - (29%)
Similarity:108/235 - (45%) Gaps:17/235 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GRITNGNLASEGQVPYIVGVS-LNSNGNWWWCGGSIIGHTWVLTAAHCTAGADEASLYYGAVNYN 102
            |.|..|:.|.....||:..:. ::.......|||.:|...:|||||||:......:|  ||.|..
  Rat    19 GEIIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSGSKINVTL--GAHNIK 81

  Fly   103 E-PAFRHTVSSENFIRYPHYVG--LDHDLALIK-TPHVDFYSLVNKIELPSLDDRYNSYENNWVQ 163
            | ...:..:.....|.:|.|..  :.:|:.|:| .......|.|..:.||..:.:....:..:| 
  Rat    82 EQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPGDVCYV- 145

  Fly   164 AAGWGAIYDGSNVVEDLRVVDLKVISVAECQAYYGTDTASENTICVETPDGK-ATCQGDSGGPLV 227
             ||||.:.......:.|:.|:|.|....:|::|........|.||...|..| |:.:||||||||
  Rat   146 -AGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICAGDPKIKRASFRGDSGGPLV 209

  Fly   228 TKEGDKLIGITSFVSAYGCQVGG-PAGFTRVTKYLEWIKE 266
            .|:      :.:.:.:||...|. |..||:|:.:|.|||:
  Rat   210 CKK------VAAGIVSYGQNDGSTPRAFTKVSTFLSWIKK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiNP_524555.1 Tryp_SPc 41..266 CDD:238113 67/231 (29%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 68/233 (29%)

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