DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Cii and Ctrb1

DIOPT Version :9

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_079859.2 Gene:Ctrb1 / 66473 MGIID:88559 Length:263 Species:Mus musculus


Alignment Length:267 Identity:91/267 - (34%)
Similarity:133/267 - (49%) Gaps:22/267 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFVFLALAVAAAT---AVPAPAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWWCG 64
            |::....|:..||   .|||....||..      .||.||..|..|..|:.|.|. ...|..:||
Mouse     4 LWLVSCFALVGATFGCGVPAIQPVLTGL------SRIVNGEDAIPGSWPWQVSLQ-DRTGFHFCG 61

  Fly    65 GSIIGNTWVLTAAHCTNGASGVTINYGASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIR- 128
            ||:|...||:|||||....:.|.:.......:..:....:....:.::..:||..:.|||:|:: 
Mouse    62 GSLISENWVVTAAHCGVKTTDVVVAGEFDQGSDEENVQVLKIAQVFKNPKFNSFTVRNDITLLKL 126

  Fly   129 -TPHVDFWSLVNKVELPSYNDRYQDYAGWWAVASGWGGT-YDGSPLPDWLQSVDVQIISQSDCSR 191
             || ..|...|:.|.||:.:|.:.  ||.....:|||.| |:....||.||...:.|:|::.|..
Mouse   127 ATP-AQFSETVSAVCLPTVDDDFP--AGTLCATTGWGKTKYNALKTPDKLQQAALPIVSEAKCKE 188

  Fly   192 TW--SLHDNMICINTDGGKSTCGGDSGGPLVTH-DGN-RLVGVTSFGSAAGCQSGAPAVFSRVTG 252
            :|  .:.|.|||... .|.|:|.||||||||.. ||. .|.|:.|:||.. |.:..|||::|||.
Mouse   189 SWGSKITDVMICAGA-SGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGF-CSTSTPAVYARVTA 251

  Fly   253 YLDWIRD 259
            .:.|:::
Mouse   252 LMPWVQE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 81/231 (35%)
Ctrb1NP_079859.2 Tryp_SPc 33..256 CDD:214473 81/228 (36%)
Tryp_SPc 34..259 CDD:238113 81/231 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I4390
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

Return to query results.
Submit another query.