DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Cii and CG34409

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001097728.2 Gene:CG34409 / 5740854 FlyBaseID:FBgn0085438 Length:511 Species:Drosophila melanogaster


Alignment Length:304 Identity:72/304 - (23%)
Similarity:130/304 - (42%) Gaps:81/304 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AVAAATA-VPAPAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLF----SGNGNWWCGGSIIG 69
            :::..|| :|..||:.|.....:::.|:..|..|..|:.|::..:.:    |...::.|.||:|.
  Fly   223 SLSTTTASMPPFAQENTQGCGINVESRLLGGDQASAGQFPWLTRIAYRNRSSSRISFRCSGSLIS 287

  Fly    70 NTWVLTAAHC-TNGASGVTINYGASIRTQPQYTHWVGSGD---------IIQHHHYNSGNLHNDI 124
            :..::||||| .|..|.:.:::   :|        :||.|         :|.|.:|:.....|||
  Fly   288 SNHIVTAAHCVVNLVSDLELSH---VR--------LGSQDGATPFAIEQVIVHPNYDQPKYANDI 341

  Fly   125 SLIR--------TPHVDFWSLVNKVELP-----SYNDRYQDYAGWWAVASGW--GGTYDGSPLPD 174
            :|:|        ||          :.||     :..:|   ..|...||:||  |.|.:.|.:..
  Fly   342 ALLRINSTNGTFTP----------ICLPFNGPITLGNR---LIGQIGVAAGWSIGSTENNSSMDP 393

  Fly   175 -----WLQSVDVQIISQSDCSRTW-SLHDNM----------ICINTDGGKSTCGGDSGGPLVTHD 223
                 .::.:.:.|::.:.|:..: ||.:|.          :|.........|.||||||.: .|
  Fly   394 SNSTAGVRFIRLPIVNTTSCAIAYASLSENFQQPIVITPNHLCAQGMPMNDVCRGDSGGPFM-DD 457

  Fly   224 GN----------RLVGVTSFGSAAGCQSGAPAVFSRVTGYLDWI 257
            |.          .::|:.:||......:..|.|::.|:.:.|||
  Fly   458 GTSGVFGTSGRYTIIGIVAFGPTLCGVTTIPGVYTLVSSFSDWI 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 65/277 (23%)
CG34409NP_001097728.2 Tryp_SPc 252..501 CDD:238113 63/273 (23%)

Return to query results.
Submit another query.