DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Cii and Tpsab1

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:279 Identity:89/279 - (31%)
Similarity:124/279 - (44%) Gaps:36/279 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFVFLALAVAAATAVPAPAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWW--- 62
            |...:.|.|.:.::....||:..:   |.:.|.|    |..|...|.|:.|.|..  |..:|   
  Rat    38 MLKLLLLTLPLLSSLVHAAPSLAM---PREGIVG----GQEASGNKWPWQVSLRV--NDTYWMHF 93

  Fly    63 CGGSIIGNTWVLTAAHCTNGASGVTINYGASIRTQPQY--THWVGSGDIIQHHHYNSGNLHNDIS 125
            ||||:|...||||||||..............:|.|..|  .|.:....||.|..:.......||:
  Rat    94 CGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQDGADIA 158

  Fly   126 LIR-TPHVDFWSLVNKVELPSYNDRYQDYAGWWAVASGWGGTYD--GSPLPDWLQSVDVQIISQS 187
            |:: |..|:..|.|:.|.||..::.:......|  .:|||...:  ..|.|..|:.|.|.|:...
  Rat   159 LLKLTNPVNITSNVHTVSLPPASETFPSGTLCW--VTGWGNINNDVSLPPPFPLEEVQVPIVENR 221

  Fly   188 DCSRTW--------SLH---DNMICINTDGGKSTCGGDSGGPLV--THDGNRLVGVTSFGSAAGC 239
            .|...:        ::|   |:|:|...:|..| |.||||||||  ..|.....||.|:|.  ||
  Rat   222 LCDLKYHKGLNTGDNVHIVRDDMLCAGNEGHDS-CQGDSGGPLVCKVEDTWLQAGVVSWGE--GC 283

  Fly   240 -QSGAPAVFSRVTGYLDWI 257
             |...|.:::|||.|||||
  Rat   284 AQPNRPGIYTRVTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 81/244 (33%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:238113 81/246 (33%)

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