DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Cii and modSP

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:225 Identity:63/225 - (28%)
Similarity:82/225 - (36%) Gaps:56/225 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNG---NWWCGGSIIGNTWVLTAAHCTNG------ 82
            ||||...   :.||......||:.|||....|.   ::.||||::....|:|||||...      
  Fly   363 TPIKQFS---SGGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLP 424

  Fly    83 ---------ASGVTINYGASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISL------------ 126
                     |:....|||.:  |..:....|...:|...:...:.|.:.|::|            
  Fly   425 YSYDTFRVIAAKFYRNYGET--TPEEKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHV 487

  Fly   127 IRTPHVDFWSLVNKVELPSYNDRYQ-DYAGWWAVASGWGGTYDGSPLPDWLQSVDVQIISQSDCS 190
            ||...|.|.|...|   .|..|..| .:|||            .......||.|.....|.|.|.
  Fly   488 IRPICVTFASFAEK---ESVTDDVQGKFAGW------------NIENKHELQFVPAVSKSNSVCR 537

  Fly   191 RTWSLHD---NMICINTDGGKSTCGGDSGG 217
            |  :|.|   :..||.|.|....|.|||||
  Fly   538 R--NLRDIQADKFCIFTQGKSLACQGDSGG 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 59/216 (27%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 59/214 (28%)
Blue background indicates that the domain is not in the aligned region.

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