DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Cii and snk

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:190 Identity:31/190 - (16%)
Similarity:68/190 - (35%) Gaps:55/190 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IRSLDIMIQELEEQFDKPEDKVLEDYQNRCTELKQASSYVEPTPEEKRRLRTKPKATDPAGDDVM 97
            ::.::.:||.:|.:.|.            .::....:|....|..|...|...||.:..:...:.
  Fly    11 VQQIESIIQTIESKIDV------------SSQQHSPASNSSSTKSEDSGLDDGPKKSVTSAKPIS 63

  Fly    98 REVRQFHDQKYEKELRSELFNGNFSTIRRRAGQKVAENLEQTVKQYSTEQERLAEDMLKLTRNLK 162
            |:                     .|.:.:.:|..:...|||      .|...:::|.|.     .
  Fly    64 RK---------------------SSRMSQSSGVSLPPVLEQ------LEHMIISDDWLG-----S 96

  Fly   163 EQTETAGKILKKDTEIVS----KSAKLTDQNTSSLTTESTK-----LQENSKKACKCWMW 213
            |.|..:|  ||:..::..    :..||::...:.:|:.|.|     |..:.:::...|::
  Fly    97 ESTSPSG--LKQHAQVAKTRSREGQKLSELGRTLVTSASLKSYIDLLSSHHRQSIASWLY 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 31/187 (17%)
snkNP_524338.2 CLIP 93..139 CDD:197829 11/52 (21%)
Tryp_SPc 186..430 CDD:238113
Blue background indicates that the domain is not in the aligned region.

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