DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Cii and CG4927

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster


Alignment Length:183 Identity:34/183 - (18%)
Similarity:65/183 - (35%) Gaps:42/183 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 MIQELEEQFDKPEDKVLEDYQNRCTELKQASSYVEPTPEEKRRLRTKPKATDPAGD--------D 95
            |:::..:.|.|.|         |......:.||..........|..:|||:...|:        .
  Fly     1 MLEKYCQCFSKDE---------RPVSNTTSGSYQLSQGNGNETLLHQPKASTTTGNSNSAAKQQQ 56

  Fly    96 VMREVRQFHDQKYEKELRSELFNGNFSTIRRRAGQKVAENLEQTVKQYSTEQERLA-------ED 153
            .:...:|...|:.:|:|:.       ||....:|..:..|:   |..|.:.....|       ||
  Fly    57 SLYSKQQPQPQQQQKQLQQ-------STASVASGPNLPPNV---VASYPSSSSAAATSAGLWSED 111

  Fly   154 ----MLKLTRNLKEQTE----TAGKILKKDTEIVSKSAKLTDQNTSSLTTEST 198
                :...|...::|.:    ::|..:.....:|::....:...|::.||.||
  Fly   112 NPFVVSSATAQQQQQQQQPPHSSGVNVNVTVNVVARPVTASTMTTTTATTTST 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 34/183 (19%)
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 11/60 (18%)

Return to query results.
Submit another query.