DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Cii and Send1

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:269 Identity:74/269 - (27%)
Similarity:116/269 - (43%) Gaps:53/269 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VFLALAVAAATAVPA---PAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWWCGGS 66
            :.||:.:..:..||.   |::::......||.            .||:.|.|.:  .|..:||||
  Fly     8 LLLAVHLLISPVVPVLLEPSERIIGGSSMDIT------------DVPWQVSLQY--YGEHFCGGS 58

  Fly    67 IIGNTWVLTAAHCTNGASGVTINYGASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIRTPH 131
            |...|.::|||||...... :|..|:|:.......  ||....|.|..::..|:.||::::    
  Fly    59 IYSKTIIITAAHCIKEGER-SIRAGSSLHDSGGVV--VGVEAYIIHPQFDKHNMENDVAVL---- 116

  Fly   132 VDFWSLVNKVELP-SYNDRYQDY--------AGWWAVASGWGGTYDGSPL--PDWLQSVDVQIIS 185
                    |:..| |::|..|..        ....|:|:|||   .|:.|  |..||.|::.|..
  Fly   117 --------KLSSPLSFSDSIQTIPLAETDPPTSSSALATGWG---RGNFLIRPRQLQGVEILIRP 170

  Fly   186 QSDCSRTW--SLHDNMICINTDGGKSTCGGDSGGPLVTHDGNRLVGVTSFGSAAGCQSGAPAVFS 248
            ...|...:  .:.:..||... .||..|.||||||||.:  .:|||:||......|...  ::::
  Fly   171 LIVCKLKYGNGVFNEDICAGR-MGKGGCYGDSGGPLVFN--GQLVGITSRTGNIVCLGS--SLYA 230

  Fly   249 RVTGYLDWI 257
            .|..|.:||
  Fly   231 SVARYRNWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 67/235 (29%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 67/246 (27%)

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