DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Cii and 1810009J06Rikl

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:1810009J06Rikl / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:276 Identity:89/276 - (32%)
Similarity:134/276 - (48%) Gaps:51/276 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFVFLALAVAAATAVPAPAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNG-NWWCG 64
            ||:.:|.|. :.||.|:          |:.| ..:|..||...:..|||.|.|   .:| :..||
  Rat     1 MKISIFFAF-LGAAVAL----------PVND-DDKIVGGYTCPKHLVPYQVSL---HDGISHQCG 50

  Fly    65 GSIIGNTWVLTAAHCTN-------GASGVTINYGASIRTQPQYTHWVGSGDIIQHHHYNSGNLHN 122
            ||:|.:.|||:||||..       |...:.:..|..        .::.:..||:|..||...|.|
  Rat    51 GSLISDQWVLSAAHCYKRKLQVRLGEHNIHVLEGGE--------QFIDAEKIIRHPEYNKDTLDN 107

  Fly   123 DISLI--RTPHVDFWSLVNKVELP---SYNDRYQDYAGWWAVASGWGGTYD-GSPLPDWLQSVDV 181
            ||.||  ::|.| ..|.|:.|.||   :..|..       .:.||||.|.. |...|..||.::.
  Rat   108 DIMLIKLKSPAV-LNSQVSTVSLPRSCASTDAQ-------CLVSGWGNTVSIGGKYPALLQCLEA 164

  Fly   182 QIISQSDCSRTW--SLHDNMICIN-TDGGKSTCGGDSGGPLVTHDGNRLVGVTSFGSAAGCQSGA 243
            .::|.|.|.:::  .:..||.|:. .:|||.:|.||||||:|.:  ..:.|:.|:||....: |.
  Rat   165 PVLSASSCKKSYPGQITSNMFCLGFLEGGKDSCDGDSGGPVVCN--GEIQGIVSWGSVCAMR-GK 226

  Fly   244 PAVFSRVTGYLDWIRD 259
            |.|:::|..||.||::
  Rat   227 PGVYTKVCNYLSWIQE 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 80/241 (33%)
1810009J06RiklNP_775423.1 Tryp_SPc 24..243 CDD:238113 80/241 (33%)

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