DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Cii and try-3

DIOPT Version :9

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001367393.1 Gene:try-3 / 183420 WormBaseID:WBGene00006621 Length:313 Species:Caenorhabditis elegans


Alignment Length:264 Identity:76/264 - (28%)
Similarity:109/264 - (41%) Gaps:73/264 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LFSGN-----GNWW--------------CGGSIIGNTWVLTAAHCT---NGASGVTI-----NYG 91
            :..||     .||.              ||.::|.:.|::|||||.   ...|.|.:     |..
 Worm    38 IIGGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVREPKNNRE 102

  Fly    92 ASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIRTPHVDFWSLVNKVELPSYND-----RYQ 151
            .|...:..|.|   ||       ||:....|||:|:|... |...|..|.....::|     :|:
 Worm   103 RSFSVKEAYIH---SG-------YNNQTADNDIALLRISS-DLSKLGIKPVCLVHDDSKLLKQYK 156

  Fly   152 DYAGWWAVASGWGGTY--DGSPLP-----DWLQSVDVQIISQSDCSRTWSLHDNMICINTDGGK- 208
            :     .|..|:|.|.  |.|..|     ..|||..|.|||..||.:||... :::.:...|.: 
 Worm   157 N-----GVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFL-SLLSVKITGYQI 215

  Fly   209 -------STCGGDSGGPLVTHDGNR---LVGVTSFGSAAGC-----QSGAPAVFSRVTGYLDWIR 258
                   .|..|||||||:.|..|.   .:|:||:| |.|.     |...|.|::|::.|:.||:
 Worm   216 CAGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYG-ADGLDGVIDQGKFPGVYTRISKYVPWIQ 279

  Fly   259 DNTG 262
            ...|
 Worm   280 GVIG 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 75/260 (29%)
try-3NP_001367393.1 Tryp_SPc 38..279 CDD:238113 74/258 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.