DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Cii and LOC1276349

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_315686.2 Gene:LOC1276349 / 1276349 VectorBaseID:AGAMI1_001951 Length:301 Species:Anopheles gambiae


Alignment Length:299 Identity:104/299 - (34%)
Similarity:148/299 - (49%) Gaps:49/299 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFVFLALAVAAATAVPAPAQKLTPTPIKDI-------------------QGRITNGYPAYEGKVP 48
            |.|....|||:|..:.....::  .||:|.                   ..|:|||..|..|:.|
Mosquito     6 LLVACLAAVASAEWIEIDWSRV--RPIEDFDHYWERLPQQLQIYRHVRPSHRVTNGQEATPGQFP 68

  Fly    49 YIVGL-----LFSGNGNWWCGGSIIGNTWVLTAAHCTNGASGVTINYGASI---------RTQPQ 99
            |.:.|     :.||    .||||::.|.::||||||..|.:|:..:.|.:|         ....|
Mosquito    69 YQIALVSEFVITSG----LCGGSVLTNNFILTAAHCVVGTAGILASGGTAIIGAHNRNTAEASQQ 129

  Fly   100 YTHWVGSGDIIQHHHYNSGNLHNDISLIR--TPHVDFWSLVNKVELPSYNDRYQDYAGWWAVASG 162
            ...:.|.| :|.|..|.|.||.|||:|:|  .|.| |...|..|.||:.:|..| :.|:....||
Mosquito   130 RIRFSGPG-VIPHPFYASSNLRNDIALVRLDAPIV-FNDRVQPVRLPARSDTRQ-FGGFLGTVSG 191

  Fly   163 WGGTYDGS-PLPDWLQSVDVQIISQSDCSRTWS---LHDNMICINTDGGKSTCGGDSGGPLVTHD 223
            :|.|.|.| ...|.:......:::.:||...|:   :....:|::.:||:|.|.|||||||...|
Mosquito   192 FGRTSDASTATSDVVMFTTNPVMTNADCIAQWNSALIEPQQVCLSGEGGRSACNGDSGGPLAVQD 256

  Fly   224 GNRL-VGVTSFGSAAGCQSGAPAVFSRVTGYLDWIRDNT 261
            |..| |||.|||||.||..|.|:|::||:.:||||..|:
Mosquito   257 GGSLQVGVVSFGSAGGCSIGMPSVYARVSFFLDWIVANS 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 93/244 (38%)
LOC1276349XP_315686.2 None

Return to query results.
Submit another query.