DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Cii and gzma

DIOPT Version :10

Sequence 1:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:243 Identity:72/243 - (29%)
Similarity:114/243 - (46%) Gaps:29/243 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ITNGYPAYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAAHCTNGASGVTINYGA-SIRTQPQ 99
            |.:|..|.....|| :..::|..|:  |||::|...||||||||....|.|.:  || .::::..
 Frog    35 IIDGREAASHSRPY-MAYIYSRTGS--CGGTLIKQNWVLTAAHCVVNNSEVIL--GAHKVKSREN 94

  Fly   100 YTHWVGSGDIIQHHHYNSGNLHNDISLIRTPHVDFWSLVNK----VELPSYNDRYQDYAGWWAVA 160
            ..........|.|..:......:||.|::   :...:.:||    ::||:.:...:  .|.....
 Frog    95 EQQRFSVARAIPHPCFEWKKKIHDIQLLQ---IKGAAKLNKFVSVLKLPTTDMDVK--PGSSCST 154

  Fly   161 SGWGGTYDGSPLP-DWLQSVDVQIISQSDCSRTW-----SLHDNMICI----NTDGGKSTCGGDS 215
            :|||.|......| |.|:.|:|.::.:..|::.:     .:..||:|.    .:|.....|.|||
 Frog   155 AGWGVTKPNGKTPSDVLREVNVTVVDRGTCNKIYKKFKTEISTNMLCAGAPKKSDKKYDACQGDS 219

  Fly   216 GGPLVTHDGNRLVGVTSFGSAAGCQSGAPAVFSRVTG-YLDWIRDNTG 262
            ||||:.  |....|:.|||...| ....|.:::|:|. ||.||||.||
 Frog   220 GGPLIC--GKEFSGIVSFGKKCG-DPKYPGIYTRLTARYLQWIRDVTG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 69/239 (29%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 69/239 (29%)

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