DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Ciii and snk

DIOPT Version :9

Sequence 1:NP_001287598.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:260 Identity:75/260 - (28%)
Similarity:119/260 - (45%) Gaps:56/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ITNGYPAYEGKVPYIVGLLFS-GNGN------WWCGGSIIGNTWVLTAAHCTNGASGV--TINYG 91
            |..|.|...|..|::..|.:: |:|:      |.|||:::...:|||||||....|..  .:..|
  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250

  Fly    92 A-----SIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIR-TPHVDF---------WSLVNKV 141
            |     :..||......:    |:.|..|.|...::||:|:: |..|.|         |.| .::
  Fly   251 ARQLNETSATQQDIKILI----IVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQL-PEL 310

  Fly   142 ELPSYNDRYQDYAGWWAVASGWGGTYDGSPLPDWLQSVDVQIISQSDCSRTW--------SLHDN 198
            ::|:            .||:|||.|.......:.|:.||:.::.|..|.:.:        .:.:.
  Fly   311 QIPT------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEG 363

  Fly   199 MICIN-TDGGKSTCGGDSGGPL--VTHDGN---RLVGVTSFGSAAGCQSGAPAVFSRVTGYLDWI 257
            ..|.. ..||:.||.||||||:  :..:.|   .:||:||||......: ||.|::|:..|||||
  Fly   364 QFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPN-APGVYTRLYSYLDWI 427

  Fly   258  257
              Fly   428  427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_001287598.1 Tryp_SPc 36..260 CDD:238113 75/260 (29%)
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/260 (29%)
Tryp_SPc 186..427 CDD:214473 73/258 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437012
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
32.840

Return to query results.
Submit another query.