DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Ciii and CG4914

DIOPT Version :10

Sequence 1:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_648711.1 Gene:CG4914 / 39597 FlyBaseID:FBgn0036436 Length:374 Species:Drosophila melanogaster


Alignment Length:269 Identity:82/269 - (30%)
Similarity:132/269 - (49%) Gaps:34/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PAPAQKLTPT-----PIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAA 77
            ||...:.:||     ..::.:.||..|......:.|::..|.:.  ..::|||::|.:.:|||||
  Fly   105 PAAQNQTSPTCSCRCGERNDESRIVGGTTTGVSEYPWMARLSYF--NRFYCGGTLINDRYVLTAA 167

  Fly    78 HCTNGASG--VTINYG----ASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIR-TPHVDFW 135
            ||..|...  :.:.:|    .:.:.:|: |.:|...   ....::..|..|||:|:| ...|...
  Fly   168 HCVKGFMWFMIKVTFGEHDRCNDKERPE-TRFVLRA---FSQKFSFSNFDNDIALLRLNDRVPIT 228

  Fly   136 SLVNKVELPSYNDRYQDYAGWWAVASGWGG-TYDGSPLPDWLQSVDVQIISQSDCSRTWS----- 194
            |.:..:.||....|...:.|..|:|:|||. ..||.| ...||.|:|.::...:|....:     
  Fly   229 SFIRPICLPRVEQRQDLFVGTKAIATGWGTLKEDGKP-SCLLQEVEVPVLDNDECVAQTNYTQKM 292

  Fly   195 LHDNMICINTD--GGKSTCGGDSGGPLV--THDGNRL--VGVTSFGSAAGC-QSGAPAVFSRVTG 252
            :..||:|....  ||:.:|.||||||||  ..|..|.  :|:.|:|:  || :...|.|::|||.
  Fly   293 ITKNMMCSGYPGVGGRDSCQGDSGGPLVRLRPDDKRFEQIGIVSWGN--GCARPNYPGVYTRVTK 355

  Fly   253 YLDWIRDNT 261
            |||||.:|:
  Fly   356 YLDWIVENS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 76/243 (31%)
CG4914NP_648711.1 Tryp_SPc 128..363 CDD:238113 76/243 (31%)

Return to query results.
Submit another query.