DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Ciii and SPH93

DIOPT Version :10

Sequence 1:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster


Alignment Length:272 Identity:62/272 - (22%)
Similarity:108/272 - (39%) Gaps:76/272 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NGYPAYEG---------KVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAAHCTNGASGVTINYGAS 93
            ||....||         :.|:.|.:..  ||.:..|||:|....|||.||..     :||.....
  Fly   239 NGLQMVEGITIDQARPAQYPWAVAIFH--NGQYLAGGSLIQPNVVLTVAHRV-----ITIETELV 296

  Fly    94 IRTQPQYTHWVGSGDI-----------------IQHHHYNSGNLHNDISL--IRTP-----HVDF 134
            :|        .|..|:                 :.|..::..:..|:::|  :.:|     |   
  Fly   297 VR--------AGDWDLKSDREIFLSEQREVERAVIHEGFDFKSGANNLALLFLNSPFKLNDH--- 350

  Fly   135 WSLVNKVELPSYNDRYQDYAGWWAVASGWGG-TYDGSPLPDWLQSVDVQIISQSDCSR------- 191
               :..:.||:.|   :.:||.....:|||. .|:.......|:.|.:.:::::.|.:       
  Fly   351 ---IRTICLPTPN---KSFAGRRCTVAGWGKMRYEDQRYSTVLKKVQLLVVNRNVCEKFLRSTRL 409

  Fly   192 --TWSLHDNMICINTDGGKSTCGGDSGGPLVTHDGN------RLVGVTSFGSAAGC-QSGAPAVF 247
              .:.|..|:||...:.|:.||.||.|..|....|.      ...|:.::|  .|| |.|.||::
  Fly   410 GAKFELPKNIICAGGELGRDTCTGDGGSALFCSIGGENSGVYEQAGIVNWG--VGCGQEGIPAIY 472

  Fly   248 SRVTGYLDWIRD 259
            :.|:.:.:||.:
  Fly   473 TEVSKFTNWITE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 62/272 (23%)
SPH93NP_609840.1 Herpes_BLLF1 <78..>226 CDD:282904
Tryp_SPc 252..482 CDD:214473 56/255 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.