DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Ciii and CG18557

DIOPT Version :10

Sequence 1:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_608721.1 Gene:CG18557 / 33483 FlyBaseID:FBgn0031470 Length:343 Species:Drosophila melanogaster


Alignment Length:263 Identity:62/263 - (23%)
Similarity:107/263 - (40%) Gaps:79/263 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAAH-----------CTNGA------SGVTIN 89
            |...:.|:.|.|: ....|::..|:::....|:||||           ...||      :|.||.
  Fly    90 AKPNEFPWTVALM-QNLINFFGAGTLVTENIVITAAHLMLDKTINDFGIIGGAWDLKQLAGKTIQ 153

  Fly    90 YGASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIRTPHVDFWSLVNKVEL-----PSYN-- 147
            :..:.|             |:.|..:|.....|:|:||    |...|.|.|..:     |:..  
  Fly   154 WRTATR-------------IVSHPDFNKMTGANNIALI----VLETSFVMKPPIGPICWPTSGVS 201

  Fly   148 -DRYQDYAGWWAVASGWGGTYDGSPLPDWL--------QSVDVQIISQSDCS---------RTWS 194
             ||.:      .:.:|||       .||:|        :.:|:.|:|:|||.         :::.
  Fly   202 FDRER------CLVAGWG-------RPDFLAKNYSYKQKKIDLPIVSRSDCESLLRRTAFVQSFQ 253

  Fly   195 LHDNMICINTDGGKSTCGGDSGGPLVT----HDG-NRLVGVTSFGSAAGCQSGAPAVFSRVTGYL 254
            |...::|...:.|:..|.||.|.||:.    |.. ..|||:.:.|.:.|.:: .||:::.::...
  Fly   254 LDPTILCAGGERGRDACIGDGGSPLMCPIPGHPAIYELVGIVNSGFSCGLEN-VPALYTNISHMR 317

  Fly   255 DWI 257
            .||
  Fly   318 PWI 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 62/263 (24%)
CG18557NP_608721.1 Tryp_SPc 90..320 CDD:214473 60/261 (23%)

Return to query results.
Submit another query.