DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Ciii and Tpsb2

DIOPT Version :9

Sequence 1:NP_001287598.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:283 Identity:93/283 - (32%)
Similarity:129/283 - (45%) Gaps:44/283 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFVFLALAVAAATAVPAPAQKLTPTPIKDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWW--- 62
            :||.:.|||:..|:....||.      |:|...| |..|..|.|.|.|:.|.|.|  ..::|   
  Rat     2 LKLLLLLALSPLASLVHAAPC------PVKQRVG-IVGGREASESKWPWQVSLRF--KFSFWMHF 57

  Fly    63 CGGSIIGNTWVLTAAHCTNGASGVTINYGASIRTQ--PQYTHWVGS----GDIIQHHHYNSGNLH 121
            ||||:|...||||||||.    |:.|......|.|  .||.::...    ...:.|.||.:....
  Rat    58 CGGSLIHPQWVLTAAHCV----GLHIKSPELFRVQLREQYLYYADQLLTVNRTVVHPHYYTVEDG 118

  Fly   122 NDISLIRTPH-VDFWSLVNKVELPSYNDRYQDYAGWWAVASGWGGTYDGSPL--PDWLQSVDVQI 183
            .||:|:...: |:..:.::...||..::.:......|  .:|||......||  |..|:.|.|.|
  Rat   119 ADIALLELENPVNVSTHIHPTSLPPASETFPSGTSCW--VTGWGDIDSDEPLLPPYPLKQVKVPI 181

  Fly   184 ISQSDCSRTWS-----------LHDNMICINTDGGKSTCGGDSGGPLVTH-DGNRL-VGVTSFGS 235
            :..|.|.|.:.           :.|.|:|.......| |.||||||||.. .|..| .||.|:|.
  Rat   182 VENSLCDRKYHTGLYTGDDVPIVQDGMLCAGNTRSDS-CQGDSGGPLVCKVKGTWLQAGVVSWGE 245

  Fly   236 AAGC-QSGAPAVFSRVTGYLDWI 257
              || ::..|.:::|||.|||||
  Rat   246 --GCAEANRPGIYTRVTYYLDWI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99CiiiNP_001287598.1 Tryp_SPc 36..260 CDD:238113 82/248 (33%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 82/248 (33%)
Tryp_SPc 30..266 CDD:214473 80/246 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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