DRSC/TRiP Functional Genomics Resources

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Protein Alignment trp and trpc5b

DIOPT Version :10

Sequence 1:NP_476768.1 Gene:trp / 43542 FlyBaseID:FBgn0003861 Length:1275 Species:Drosophila melanogaster
Sequence 2:XP_073791538.1 Gene:trpc5b / 559586 ZFINID:ZDB-GENE-091112-24 Length:1026 Species:Danio rerio


Alignment Length:974 Identity:381/974 - (39%)
Similarity:543/974 - (55%) Gaps:129/974 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RLDYDLMMAEEYILSDVEKNFILSCERGDLPGVKKILEEYQGTDKFNINCTDPMNRSALISAIEN 80
            |:...::.| |..||..|:.::.:.|:||..|||:.|||.......|:||.||:.||||:.||||
Zfish    20 RIPLQIVRA-EVELSAKERAYLTAVEKGDYAGVKQALEEADIYYNINVNCLDPLGRSALLIAIEN 83

  Fly    81 ENFDLMVILLEHNIEVGDALLHAISEEYVEAVEELLQWEETNHKEGQPYSWEAVDRSKSTFTVDI 145
            ||.::|.:||.|.:..|||||:||.:|.|.|||.||.:.:...::..|..  .:|...|.||.||
Zfish    84 ENLEVMELLLSHGVHTGDALLYAIRKEVVGAVELLLSYRKPCGEKQVPSL--MMDTQFSEFTPDI 146

  Fly   146 TPLILAAHRNNYEILKILLDRGATLPMPHDVKCGCDECVTSQMTDSLRHSQSRINAYRALSASSL 210
            ||::||||.|||||:|:|:.|..|:|.||.::|.|.|||:|...||||||:||:|.|:||::.||
Zfish   147 TPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVECVSSSEVDSLRHSRSRLNIYKALASPSL 211

  Fly   211 IALSSRDPVLTAFQLSWELKRLQAMESEFRAEYTEMRQMVQDFGTSLLDHARTSMELEVMLNFNH 275
            |||||.||:||||:|.||||.|..:|:|||.||.|:.|..:.|...|||.||:|.|||.:||...
Zfish   212 IALSSEDPILTAFRLGWELKELSKVENEFRQEYDELSQQCKLFAKDLLDQARSSRELETILNHRD 276

  Fly   276 EPSHDIWCLGQRQTLERLKLAIRYKQKTFVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVVKL 340
            :.|.:: .||:.:.|.:|||||:|.||.|||.||.|||||.:||||.||:||:..:.:|:....:
Zfish   277 DHSEEL-DLGECRDLAKLKLAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFII 340

  Fly   341 GCSFPIYSLKYILAPDSEGAKFMRKPFVKFITHSCSYMFFLMLLGAASLRVVQITFELLAFPWML 405
            |..||::|:.|:|||.|....|::|||:|||.|:.||:.||.||..||..:||...         
Zfish   341 GLLFPVFSIIYLLAPKSTLGTFIKKPFIKFICHTASYLTFLFLLLLASQHIVQTDL--------- 396

  Fly   406 TMLEDWRKHERGSLPGPIELAIITYIMALIFEELKSLYSDGLFEYIMDLWNIVDYISNMFYVTWI 470
                    |.:|..|..:|..|:.:::..|:.|:|.::..|..|||.|.||::|:..|..|:..|
Zfish   397 --------HVQGPPPTFVEWMILPWVLGFIWAEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATI 453

  Fly   471 LCRATAWVIVHRDLWFRGIDPYF------PREHWHPFDPMLLSEGAFAAGMVFSYLKLVHIFSIN 529
            ..:..|               ||      ||..|..:.|.|::|..||...:||.|:|:.:|:.|
Zfish   454 SLKMVA---------------YFKYNSSRPRVEWEMWHPTLIAEALFAIANIFSSLRLISLFTAN 503

  Fly   530 PHLGPLQVSLGRMIIDIIKFFFIYTLVLFAFGCGLNQLLWYY---AELEKNKCYHLHPDVADFDD 591
            .||||||:|||||::||:||.|||.|||.||..|||||.:||   |..|.|.|..:.     .:.
Zfish   504 SHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETKASEEPNNCKGIR-----CEK 563

  Fly   592 QEKACTIWRRFSNLFETSQSLFWASFGLVDLVSFDLAGIKSFTRFWALLMFGSYSVINIIVLLNM 656
            |..|      ||.||||.|||||:.|||::|...::.....||.|....|||:|:||:::|||||
Zfish   564 QNNA------FSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNM 622

  Fly   657 LIAMMSNSYQIISERADTEWKFARSQLWMSYFEDGGTIPPPFNLCPNMKML--------RKTLGR 713
            |||||:||||:|::.||.||||||::||||||::|||:|||||:.|:.|.:        .:..|.
Zfish   623 LIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNIIPSPKSVWYLCVWLHCRLCGH 687

  Fly   714 KRPSRTKSFMRKSMERAQTLH----------DKVMKLLVRRYITAEQR-RRDDYGITEDDIIEVR 767
            ..|........|:::.....|          .:|::.||:||:.|..| .:.|.|:||::..|::
Zfish   688 GEPRHEDKCKHKNLKEFTERHADNLIQNQHYQEVIRNLVKRYVAAMIRSAKTDEGLTEENFKELK 752

  Fly   768 QDISSLRFELLEIFTNNNWDVPDIEKKSQGVARTTKGKVMERRIL---KDFQIG----------- 818
            |||||.|:|:|::..|..   |.....|.....|.:.:..|...:   ::.::|           
Zfish   753 QDISSFRYEVLDLLGNRK---PPRRTYSSSSEATQQDETAEPEEVDEERNHRLGGHTCVDEGERS 814

  Fly   819 -------FVENLKQEMSESESGRDIFSSLAKVIGRKKTQKGDKDWNAIARKNTFASDPI------ 870
                   |.:..::......|...:|.|::.....|....|       .|||.....|.      
Zfish   815 RYKASTSFSQCYRRNRESQFSISALFKSISGPAREKPESNG-------LRKNISHPSPFVQTNSR 872

  Fly   871 -----GSKRSSMQRHSQRSLRRK--IIEQANEGLQMNQT---------QLIEFNP-NLGDVTRA 917
                 .||::|:||.....||..  :.:...|.|::.|:         |....|| ||..|||:
Zfish   873 LQHFSHSKKNSLQRLGMLMLRMNGHVPDTHAETLEVQQSAYSISDRVPQTSWHNPQNLSKVTRS 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trpNP_476768.1 trp 16..776 CDD:273311 345/787 (44%)
ANK repeat 69..98 CDD:293786 14/28 (50%)
ANK repeat 99..135 CDD:293786 13/35 (37%)
ANK repeat 137..168 CDD:293786 19/30 (63%)
TRP_CaM_bind1 797..860 CDD:467881 9/83 (11%)
PRK12323 <891..1102 CDD:481241 11/37 (30%)
PspC_subgroup_2 <1015..1156 CDD:468202
trpc5bXP_073791538.1 None
Blue background indicates that the domain is not in the aligned region.

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