DRSC/TRiP Functional Genomics Resources

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Protein Alignment trp and trpc5a

DIOPT Version :10

Sequence 1:NP_476768.1 Gene:trp / 43542 FlyBaseID:FBgn0003861 Length:1275 Species:Drosophila melanogaster
Sequence 2:NP_001314676.2 Gene:trpc5a / 557456 ZFINID:ZDB-GENE-040812-1 Length:1041 Species:Danio rerio


Alignment Length:1039 Identity:392/1039 - (37%)
Similarity:570/1039 - (54%) Gaps:149/1039 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RLDYDLMMAEEYILSDVEKNFILSCERGDLPGVKKILEEYQGTDKFNINCTDPMNRSALISAIEN 80
            |:...::.| |..||..|:.|:.:.|:||..||:..|.|.:.....:.||.||:.||||:.||||
Zfish    20 RIPLQIVRA-EVELSPEERAFLSAVEKGDYAGVQHALREAEVYYNIDTNCVDPLGRSALLIAIEN 83

  Fly    81 ENFDLMVILLEHNIEVGDALLHAISEEYVEAVEELLQWEETNHKEGQPYSWEAVDRSKSTFTVDI 145
            ||.::|.:||:|.:..|||||:||.:|.|.|||.||...:.:.::..|..  .:|...|.||.||
Zfish    84 ENLEVMELLLDHGVNTGDALLYAIRKEVVGAVELLLSHRKPSGEKQVPSL--MMDAQFSEFTPDI 146

  Fly   146 TPLILAAHRNNYEILKILLDRGATLPMPHDVKCGCDECVTSQMTDSLRHSQSRINAYRALSASSL 210
            ||::||||.|||||:|:|:.|..|:|.||.::|.|.|||:|...||||||:||:|.|:||::.||
Zfish   147 TPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVECVSSSEVDSLRHSRSRLNIYKALASPSL 211

  Fly   211 IALSSRDPVLTAFQLSWELKRLQAMESEFRAEYTEMRQMVQDFGTSLLDHARTSMELEVMLNFNH 275
            |||||.||:||||:|.||||.|..:|:|||.||.|:.|..:.|...|||.||:|.|||.:||...
Zfish   212 IALSSEDPILTAFRLGWELKELSKVENEFRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRD 276

  Fly   276 EPSHDIWCLGQRQ--TLERLKLAIRYKQKTFVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVV 338
            :.|.:   |..|:  .|.:|||||:|.||.|||.||.|||||.:||||.||:||:..:.:|:...
Zfish   277 DQSEE---LDPRECRDLAKLKLAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCF 338

  Fly   339 KLGCSFPIYSLKYILAPDSEGAKFMRKPFVKFITHSCSYMFFLMLLGAASLRVVQITFELLAFPW 403
            .:|..||::||.|:|||.|....|::|||:|||.|:.||:.||.||..||..:.:...       
Zfish   339 IIGLLFPVFSLVYLLAPKSTLGLFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNL------- 396

  Fly   404 MLTMLEDWRKHERGSLPGPIELAIITYIMALIFEELKSLYSDGLFEYIMDLWNIVDYISNMFYVT 468
                      |.:|..|..:|..|:.:::..|:.|:|.::..|..||:.|.||::|:..|..|:.
Zfish   397 ----------HMQGPPPTVVEWMILPWVLGFIWAEIKEMWDGGFNEYVHDWWNLMDFAMNSLYLA 451

  Fly   469 WILCRATAWVIVHRDLWFRGIDPYFPREHWHPFDPMLLSEGAFAAGMVFSYLKLVHIFSINPHLG 533
            .|..:..|:|..:...         |||.|..:.|.|::|..||...:||.|:|:.:|:.|.|||
Zfish   452 TISLKIVAYVKYNSSR---------PREEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLG 507

  Fly   534 PLQVSLGRMIIDIIKFFFIYTLVLFAFGCGLNQLLWYY---AELEKNKCYHLHPDVADFDDQEKA 595
            |||:|||||::||:||.|||.|||.||..|||||.:||   |..|.|.|..:.     .:.|..|
Zfish   508 PLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETEAADEPNHCKGIR-----CERQNNA 567

  Fly   596 CTIWRRFSNLFETSQSLFWASFGLVDLVSFDLAGIKSFTRFWALLMFGSYSVINIIVLLNMLIAM 660
                  ||.||||.|||||:.|||::|...::.....||.|....|||:|:||:::|||||||||
Zfish   568 ------FSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAM 626

  Fly   661 MSNSYQIISERADTEWKFARSQLWMSYFEDGGTIPPPFNLCPNMK----MLRKTLGRKRPSRT-- 719
            |:||||:|::.||.||||||::||||||::|||:|||||:.|:.|    :.|...||...|.|  
Zfish   627 MNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNIIPSPKSFWYLCRWVHGRLCGSETAP 691

  Fly   720 -----------KSFMRKSMER-AQTLH-DKVMKLLVRRYITAEQR-RRDDYGITEDDIIEVRQDI 770
                       |.|..|..:| .|..| .:|::.||:||:.:..| .:...|:||::..|::|||
Zfish   692 PEEDTHKHENLKEFTEKHADRLIQNQHYQEVIRSLVKRYVASMIRSAKTSEGLTEENFKELKQDI 756

  Fly   771 SSLRFELLEIFTNNNWDVPDIEKKSQGVARTTKGKVMERRILKDFQ--------------IGFVE 821
            ||.|:|:|::..|..   |.....|.....|.:.:|.:     |.:              :.|..
Zfish   757 SSFRYEVLDLLGNRK---PPRRNYSSSSEATLRDEVSD-----DGEACHHSDGSSIGAKGVSFKT 813

  Fly   822 NLKQEMSESESGRDIFSSLAKVIGRKKTQKGDKDWNAIARKNTFASDPIGS-------------K 873
            ....:.|...|.  :|.|::.:.....|::|....|.: |||...|..:.|             :
Zfish   814 ITPSDPSYGVSA--LFHSISGMEAAGTTREGKPKINGL-RKNPSPSSSLSSVAPARAPALSRTWR 875

  Fly   874 RSSMQRHSQRSLRRKIIEQANEGLQMNQTQLIEFNPNLGDVTRATRVAYVKFMRKKMAADEVSLA 938
            |.|....|:::..|::      ||..::     ...:|...|..|...|             :::
Zfish   876 RFSRFSSSKKNSFRRL------GLLFSR-----MGSHLPQPTGVTAATY-------------TIS 916

  Fly   939 D----------DEGAPNGEGEKKPLDASGSK----KSITSGGTG-GGASM-LAAAALRASVKNV 986
            |          |.|...|:|   |:..|.:.    .::..||.| ||:.: ::....||:.::|
Zfish   917 DGLLHPPGAWHDLGFTRGDG---PVTRSETNLNQVATLNEGGIGIGGSGVGMSTNGQRANGRDV 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trpNP_476768.1 trp 16..776 CDD:273311 346/784 (44%)
ANK repeat 69..98 CDD:293786 14/28 (50%)
ANK repeat 99..135 CDD:293786 13/35 (37%)
ANK repeat 137..168 CDD:293786 19/30 (63%)
TRP_CaM_bind1 797..860 CDD:467881 11/76 (14%)
PRK12323 <891..1102 CDD:481241 21/112 (19%)
PspC_subgroup_2 <1015..1156 CDD:468202
trpc5aNP_001314676.2 None
Blue background indicates that the domain is not in the aligned region.

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