DRSC/TRiP Functional Genomics Resources

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Protein Alignment trp and xndc1

DIOPT Version :10

Sequence 1:NP_476768.1 Gene:trp / 43542 FlyBaseID:FBgn0003861 Length:1275 Species:Drosophila melanogaster
Sequence 2:NP_001017642.2 Gene:xndc1 / 550335 ZFINID:ZDB-GENE-050417-120 Length:403 Species:Danio rerio


Alignment Length:349 Identity:64/349 - (18%)
Similarity:112/349 - (32%) Gaps:79/349 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   797 GVARTTKGKVMERRILKDFQIGFVE--NLKQEMSESESGRDIFSSLAKVIGRKKTQKGDKDWNAI 859
            ||.|      :|.::.|...|||::  |......:.:.||..:||             |..:..:
Zfish    43 GVLR------VELQMEKVSAIGFIDVGNYGSAFIQVDVGRSSWSS-------------DHPFVTL 88

  Fly   860 ARKNTFASDPIGSK----RSSMQRHSQRSLRRKIIEQANEGLQMNQTQLIEFNPNLGDVTRATRV 920
            ....|..| |..||    |.:::...:.....:..|::.:.|::..||....:...|        
Zfish    89 LPTATLMS-PADSKQGTGRQNVRMFKKADFLSRAAEESWDRLRVTCTQPFNKHAQFG-------- 144

  Fly   921 AYVKFMRKKMAADEVSLADDEGAPNGEGEKKPLDASGSKKSITSGG---------TGGGAS---- 972
              :.|:|.:...|:...:.::.....|..:.|...|...:..:|..         ||.|:|    
Zfish   145 --LSFLRIRTVEDDTEDSSEQQEDTPENLRTPEKMSSVMEWFSSPAVQNTFFGRITGDGSSEAQR 207

  Fly   973 ---MLAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAGGPKPGDQK 1034
               .|:.|........:..:|.:.....|....|..:   :|..|       .|..|....|:..
Zfish   208 NAGSLSRAERMVKAAQLKRRSLSTSPCSTASSTTPQR---EDNSK-------SPPGGFTTSGELV 262

  Fly  1035 PTPGAGAPKPQAAGTISKPGESQKKDAPAPPTKPGDTKPAAPKPGESAKPEAAAKKEESSKTEA- 1098
            .||.....||:|...:.......|:..|...|......|..|:                |:.|| 
Zfish   263 KTPQEQRRKPKARQILLNSDTPLKRSRPTGSTHDHPISPKLPR----------------SQAEAR 311

  Fly  1099 SKPAATNGAAKSAAPSAPSDAKPD 1122
            .||.....:.:::.|.......||
Zfish   312 QKPIDAQDSPETSCPLCGESFSPD 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trpNP_476768.1 trp 16..776 CDD:273311
ANK repeat 69..98 CDD:293786
ANK repeat 99..135 CDD:293786
ANK repeat 137..168 CDD:293786
TRP_CaM_bind1 797..860 CDD:467881 14/64 (22%)
PRK12323 <891..1102 CDD:481241 40/227 (18%)
PspC_subgroup_2 <1015..1156 CDD:468202 21/109 (19%)
xndc1NP_001017642.2 None
Blue background indicates that the domain is not in the aligned region.

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