DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15515 and Pcp

DIOPT Version :9

Sequence 1:NP_001263088.1 Gene:CG15515 / 43538 FlyBaseID:FBgn0039719 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster


Alignment Length:105 Identity:28/105 - (26%)
Similarity:40/105 - (38%) Gaps:24/105 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLFTALVALMAAHSSAGLLDYVFP-------TIVSEYYNQAPTKEGYRFASEEPNG--SKREEMG 62
            ||...:|||......|| ..|: |       |:.::...:...|  ||:|.|..||  :.:|.:|
  Fly     3 LLVNFIVALAVLQVQAG-SSYI-PDSDRNTRTLQNDLQVERDGK--YRYAYETSNGISASQEGLG 63

  Fly    63 VIMNPGTPDEQLVVMGMYSSYDEKTDTETVTMYTADKDGY 102
            .:...|.           |||...........|.||:.||
  Fly    64 GVAVQGG-----------SSYTSPEGEVISVNYVADEFGY 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15515NP_001263088.1 Chitin_bind_4 46..102 CDD:278791 15/57 (26%)
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 15/57 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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