DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS8 and AT5G20290

DIOPT Version :10

Sequence 1:NP_651740.1 Gene:RpS8 / 43532 FlyBaseID:FBgn0039713 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_197529.1 Gene:AT5G20290 / 832151 AraportID:AT5G20290 Length:222 Species:Arabidopsis thaliana


Alignment Length:217 Identity:134/217 - (61%)
Similarity:165/217 - (76%) Gaps:9/217 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGR-VHKVRTRGGNTKLRALRLETGN 64
            |||||||.|||||||||:|..|||||:|:||..|||||.|.: |.::|.||||.|.|||||:|||
plant     1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN 65

  Fly    65 FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKH 129
            ::|.||...||||:.|||||||||||||||||||::||.:||.||:|||.:||.:.||||:....
plant    66 YSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSAS 130

  Fly   130 AQKED-----ENDVLTK---KRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGR 186
            :.|:|     |..|...   |:|..:::|...||:...::..:||||.|||:|||||||||||||
plant   131 STKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGR 195

  Fly   187 SDGYILEGKELEFYLKKIKSKK 208
            :|||||||||||||:|||:.||
plant   196 ADGYILEGKELEFYMKKIQKKK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS8NP_651740.1 PTZ00148 1..208 CDD:240292 132/215 (61%)
AT5G20290NP_197529.1 PTZ00148 1..210 CDD:240292 128/208 (62%)

Return to query results.
Submit another query.