DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS8 and Nsa2

DIOPT Version :9

Sequence 1:NP_001247362.1 Gene:RpS8 / 43532 FlyBaseID:FBgn0039713 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_599242.2 Gene:Nsa2 / 171456 RGDID:621335 Length:260 Species:Rattus norvegicus


Alignment Length:120 Identity:25/120 - (20%)
Similarity:45/120 - (37%) Gaps:27/120 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 PFRQWYEAH-----YVLPLGRKRNPKHAQKEDENDVLTKK-------------RSEKV-MKKYLE 153
            |..::.|.|     |.|....|:..|..::..|.....||             .:||: |||.::
  Rat     2 PQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIK 66

  Fly   154 RQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
            ..:....:|..:::...|.:.|.:..|.||.        ..|.|...:|:.:.:|
  Rat    67 MHEKRNTKQKDDEKTPQGAVPAYLLDREGQS--------RAKVLSNMIKQKRKEK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS8NP_001247362.1 PTZ00148 1..208 CDD:240292 24/118 (20%)
Nsa2NP_599242.2 NSA2 4..260 CDD:211393 24/118 (20%)
Nuclear localization signal. /evidence=ECO:0000255|PROSITE-ProRule:PRU00768 11..18 1/6 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..42 4/21 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2007
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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