DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS8 and Rps8-ps17

DIOPT Version :10

Sequence 1:NP_651740.1 Gene:RpS8 / 43532 FlyBaseID:FBgn0039713 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_038962391.1 Gene:Rps8-ps17 / 100363452 RGDID:2322993 Length:208 Species:Rattus norvegicus


Alignment Length:208 Identity:144/208 - (69%)
Similarity:173/208 - (83%) Gaps:2/208 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNF 65
            ||||||:.||||.||||||...||||:||||||||||:|..|:|.|:.||||.|.|||||:.|||
  Rat     1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVQVRGGNKKYRALRLDVGNF 65

  Fly    66 AWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHA 130
            :|.||...|||||.||||||||||||||||||||.||:||:||:|||||:||.||||||:..|..
  Rat    66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLT 130

  Fly   131 QKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGK 195
            .:|:|  :|.||||:|:.|||.||:|..|:.:.||:||..|::||||:||||||||:|||:||||
  Rat   131 PEEEE--ILNKKRSKKIQKKYDERKKNAKISRLLEEQFQQGKLLACIASRPGQCGRADGYVLEGK 193

  Fly   196 ELEFYLKKIKSKK 208
            ||||||:|||::|
  Rat   194 ELEFYLRKIKARK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS8NP_651740.1 PTZ00148 1..208 CDD:240292 143/206 (69%)
Rps8-ps17XP_038962391.1 PTZ00148 1..206 CDD:240292 143/206 (69%)

Return to query results.
Submit another query.