Sequence 1: | NP_001189311.1 | Gene: | Cad99C / 43528 | FlyBaseID: | FBgn0039709 | Length: | 1706 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009304712.1 | Gene: | pcdh15b / 503521 | ZFINID: | ZDB-GENE-050214-1 | Length: | 1964 | Species: | Danio rerio |
Alignment Length: | 1891 | Identity: | 513/1891 - (27%) |
---|---|---|---|
Similarity: | 810/1891 - (42%) | Gaps: | 407/1891 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAARNSLTPQQGLGFFGLLILLCSAVLGKSQMCEVE------TGQTNIILDIEESRESFIGQPTT 59
Fly 60 P------PELPIFG---DPDTEIALNL---------VFPKGQPIFQLNGKKLQLLQPLDRDEEN- 105
Fly 106 LSHIVFQVSCTTRSTGKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFR----NIQ 166
Fly 167 ALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTYYLTI 231
Fly 232 VASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGACINPEYSASV-----PAGSLL 291
Fly 292 GVLTVLPERIQAVDLD-TINSP-----IRYSFASGMPGNYADYFQIDESTGVLKQTKAVDTSTAK 350
Fly 351 KYDIIVKAEEVSPGP-QRFTTAKLEIFVKPVDAN--PPVISSSQAEGYVDENSPIGTRVLDAH-- 410
Fly 411 GNPISFMTTDADLSDS-DPKPDYIYELTTPSFNVTGDGIL--------VVNEENLDRDPPAPGRF 466
Fly 467 KFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVA-PISITAGDQSESRLVTQVTATDNDEG 530
Fly 531 PNAVVTYSIYHVSNNGIQKFTINATTGEIRT--QGRLLAGEQYSITVQATDIGGL----SSQAIV 589
Fly 590 EVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPENDAVVYSIISGNDLRQFAVGQE 654
Fly 655 SGVIIVIRKLDRESLTRYQLILKAED--TGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEE 717
Fly 718 GKAQASVGVVHATDADEGINAEITYSIPT--DIPFTINATSGEILTAKELDYEQLNEYKFVVTAK 780
Fly 781 DGAPDARLGTASVTVMVLDLPDEVPKFSDARIDVHIPENEE-NFLVATVQAFDPDSMPEITYVLR 844
Fly 845 KGNA-ELFKVSEKSGEVRTIKGLDYESQKQHQLT----IGTIE-NDGNGPGDTILLVVDVEDRND 903
Fly 904 LPPRF-------ITVPDPVTVNDDQGIGTIIATLPA--IDGDGTSPGNV-VRYEIVGRGKAPKYF 958
Fly 959 QVDPDTGAVRIRDELRKEEDTEYQVDIRAYDLGEPQLSSVAPLRVDVHHLLSSGNNEIKLDNKLE 1023
Fly 1024 SGTGMSSESIGLAFSDDSYTTSVPESMEA--------------NSTLKLIQIVNSKTSGDGPPAF 1074
Fly 1075 RCEFVSGNGGGIFNLSSADHGCNLLLIQPLDFENKSSYSLQLRLTSHRYFVNPLK-----DTTSV 1134
Fly 1135 EIIVQDENDNAPEFEFNRLRGQQDTFYT-VVTEEMDVDTTILQVRATDRDSGKFGTVRYTLYDDD 1198
Fly 1199 ENRVNMPTS----FFMMSEDTGVLRTAKHFKNENDFPLTFLVEARDSDGQEQGSHRTRARIVVNK 1259
Fly 1260 LADINRMALSFPNAAPSDLRNYYTELEELLDKKTGLVSG------------IERMSSQKYLAKNG 1312
Fly 1313 SVIENPAATDIWFYLIDPKTEQLVSRKD--SIVETTLLEPAARSE---------LNIALPRATAE 1366
Fly 1367 NISFPLERKEHVHKVKAAVAIDNEVFPFTLIAISLVILILGTIGIIYICISWSKYKNFKQRMRQY 1431
Fly 1432 SSTNPPRYDPVIVNQQASSASETIANMKEYETQMLAMAVPPDVDDDLQLDFSAKNHAFSLDNVSY 1496
Fly 1497 ITHKENTNGGGQSSPSHSDATTATIATLRRHKNLNNASMNNNLAINNRQN-------TFNRTLEM 1554
Fly 1555 NTRNNANPLASPPNGALSGTL-TLGRIKHQNSNHYQNGAYNIDPTGPNNMAHAKNNAYSTMGRR- 1617
Fly 1618 ----GN---------TFGDV--------GLLNGNGELMNATLG-----RNGQL-------NNRLY 1649
Fly 1650 GGEVPITNP-------------LFQRSNSDHNHL------SSTNENVSFGKRDYGQIGFSYLNDL 1695
Fly 1696 DRSEVE 1701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad99C | NP_001189311.1 | Cadherin_repeat | <68..138 | CDD:206637 | 24/79 (30%) |
Cadherin_repeat | 146..259 | CDD:206637 | 48/116 (41%) | ||
Cadherin_repeat | 280..383 | CDD:206637 | 35/114 (31%) | ||
Cadherin_repeat | 393..496 | CDD:206637 | 26/113 (23%) | ||
Cadherin_repeat | 518..594 | CDD:206637 | 32/81 (40%) | ||
Cadherin_repeat | 608..699 | CDD:206637 | 34/92 (37%) | ||
Cadherin_repeat | 710..802 | CDD:206637 | 38/93 (41%) | ||
Cadherin_repeat | 814..903 | CDD:206637 | 26/95 (27%) | ||
Cadherin_repeat | 915..1005 | CDD:206637 | 22/92 (24%) | ||
Cadherin_repeat | 1041..1144 | CDD:206637 | 34/121 (28%) | ||
Cadherin_repeat | 1159..1264 | CDD:206637 | 32/109 (29%) | ||
pcdh15b | XP_009304712.1 | Cadherin_repeat | 159..267 | CDD:206637 | 48/115 (42%) |
Cadherin_repeat | 288..396 | CDD:206637 | 35/114 (31%) | ||
Cadherin_repeat | 406..512 | CDD:206637 | 26/115 (23%) | ||
Cadherin_repeat | 520..616 | CDD:206637 | 36/99 (36%) | ||
Cadherin_repeat | 627..720 | CDD:206637 | 35/93 (38%) | ||
Cadherin_repeat | 729..822 | CDD:206637 | 38/94 (40%) | ||
Cadherin_repeat | 831..929 | CDD:206637 | 26/97 (27%) | ||
Cadherin_repeat | 939..1035 | CDD:206637 | 23/102 (23%) | ||
Cadherin_repeat | 1047..1148 | CDD:206637 | 34/121 (28%) | ||
Cadherin_repeat | 1161..1240 | CDD:206637 | 26/85 (31%) | ||
NESP55 | <1784..1894 | CDD:115071 | |||
SRRM_C | 1846..>1893 | CDD:291883 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 70 | 1.000 | Domainoid score | I9512 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H23401 | |
Inparanoid | 1 | 1.050 | 467 | 1.000 | Inparanoid score | I1503 |
OMA | 1 | 1.010 | - | - | QHG47650 | |
OrthoDB | 1 | 1.010 | - | - | D15091at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005384 | |
OrthoInspector | 1 | 1.000 | - | - | otm25355 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_109439 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.880 |