DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad99C and ft

DIOPT Version :9

Sequence 1:NP_001189311.1 Gene:Cad99C / 43528 FlyBaseID:FBgn0039709 Length:1706 Species:Drosophila melanogaster
Sequence 2:NP_477497.1 Gene:ft / 33627 FlyBaseID:FBgn0001075 Length:5147 Species:Drosophila melanogaster


Alignment Length:1953 Identity:432/1953 - (22%)
Similarity:707/1953 - (36%) Gaps:556/1953 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ESFIGQPTTPPELPIFGDPDTEIALNLVFPKGQPIFQLNGKK--LQLLQPLDRDEENLSHIVFQV 113
            ::|:|:.|.     :..|......|:.........|.::.:.  ::.|:|.||:      .:.:|
  Fly  1169 DTFVGKLTA-----VDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDRE------ALVKV 1222

  Fly   114 SCTTRSTGK---------------------------KRTIPIIVRVSDINDNAPRFMNTPYEVTV 151
            |....::|:                           :..:.:.|.|:|:|||||.|:..||.||:
  Fly  1223 SRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTI 1287

  Fly   152 PESTPVGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVA 216
            .|....||.| .::...|.|.|:||.|.|.:|:|:    ...:::.|.         ..||:::.
  Fly  1288 SEGASEGTHI-THVFTQDADEGLNGDVYYSLAKGN----EAGQFNLDS---------ATGQLSLG 1338

  Fly   217 KTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGACINPEY 281
            :.||.|..:.::|.:||.|.|  ....|||..::|:.:.|.||..|.|..|          :.|.
  Fly  1339 RRLDRESQEIHHLIVVAKDAA--LKHPLSSNASITIVVLDENDNAPEFTQS----------SSEV 1391

  Fly   282 SA--SVPAGSLLGVLTVLPERIQAVDLDT-INSPIRYSFASGMPGNYADYFQIDESTGVLKQTKA 343
            |.  :.|.|:.|       .|.:|.|.|. :||.:.:|.::   ||..|.|.||..||.|...|.
  Fly  1392 SVLETSPTGTEL-------MRFRASDADQGVNSQVVFSISA---GNRRDTFHIDSITGSLYLHKP 1446

  Fly   344 VDTSTAKKYDIIVKAEEVSPGPQRFTTAKLEIFVKPVDANPPVISSSQAEGYVDENSPIGTRVLD 408
            :|......|.:.:.|.:... |...||....:.|...:.|||:..|:.....:.|..|:.|    
  Fly  1447 LDYEDITSYTLNITASDCGT-PSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKT---- 1506

  Fly   409 AHGNPISFMTTDADLSDSDPKPDYIYELTTPS------FNV-TGDGIL----VVNEENLDRDPPA 462
                ||..:|.|...|..:.|..|......|.      |.: |..|::    .::.|::|     
  Fly  1507 ----PIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRESID----- 1562

  Fly   463 PGRFKFQVVA---REPRTNAASAPLSLTVHLRDVNDNAP-----KLAMVAPISITAGDQSESRLV 519
              .|:..|||   .:|.....|....:||.:.|:|||||     ..|::.|...|:  :..|..|
  Fly  1563 --TFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTS--KGSSTAV 1623

  Fly   520 TQVTATDNDEGPNAVVTY----------------------------------------------- 537
            .||.|.|.|...|.:|||                                               
  Fly  1624 MQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSE 1688

  Fly   538 ---------------------------------SIY--------------HVSNNGIQKFTINAT 555
                                             |:|              |:::..|:.|..|.|
  Fly  1689 RRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVT 1753

  Fly   556 -TGEIRTQGRLL------------------AG-EQYSITVQATDIGGLSSQAIVEVSVTP-GPNT 599
             ||......||.                  || |:|.:.|.|..:||....:..:|.||. ..|.
  Fly  1754 ATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKND 1818

  Fly   600 KPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPEN-DAVVYSIISGNDLRQFAVGQESGVIIVIRK 663
            .||:|....:...|||..:|..|::.:.|.||:. .:|.:.::.|:| .:|.:...:|.:|:...
  Fly  1819 SPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHD-GKFLLEPSTGKLILNDT 1882

  Fly   664 LDRESLTRYQLILKAEDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQA-SVGVV 727
            ||||:.::|:|.::..| |...:.|...|:|:|.||..|.||.:.  |.|.:.|...:. .||.:
  Fly  1883 LDRETKSKYELRIRVSD-GVQYTEAYATIQVSDTNDNPPLFEDTV--YSFDIPENAQRGYQVGQI 1944

  Fly   728 HATDADEGINAEITYSIPTDIP---FTINATSGEILTAKELDYEQLNEYKFVVTAKDGAPDARLG 789
            .|.|||.|.||:::|.:.:|..   |::|..:|.:.....||||::..|..:|.|:|....:...
  Fly  1945 VARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLST 2009

  Fly   790 TASVTVMVLDLPDEVPKFS----DARIDVHIPENEENFLVATVQAFDPDSMPE--ITYVLRKGNA 848
            |.:|...||||.|..|.|.    .:.:..::|...|   |.||.|.|.||...  |.|.:..|:.
  Fly  2010 TITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATE---VVTVSAKDIDSGNNGLIEYSITAGDV 2071

  Fly   849 ELFKVSEKSGEVRTIKGLDYESQKQHQLTIGT-----------------IENDGNGP-------- 888
            :.....:.:|.:||.:.||.|.:..:.||:..                 ::.....|        
  Fly  2072 DSEFGIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQ 2136

  Fly   889 -----------GDTILLVVDVEDRNDLPPRFITVPDPVTVNDDQGIGTIIATLPAIDGDGTSPGN 942
                       ..|:.:.:.::|.||..|.||:. :...:.::..|.|::..:.|:|.|....|.
  Fly  2137 EFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISA-NETAIMENVAINTVVIAVKAVDNDEGRNGY 2200

  Fly   943 V------VRYEIVGRGKAPKYFQVDPDTGAVRIRDELRKEEDTEYQVDIRAYDLGEPQLSSVAPL 1001
            :      .|.|.:|:.. |..|.::|..|.:|:.|.|.:|..:.|.::|.|.|.|||..|:.:.|
  Fly  2201 IDYLMKEARDEDMGQSD-PLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQL 2264

  Fly  1002 RVDVHHLLSSGNNEIKLDNKLESGTGMSSESIG-------------------------------L 1035
            .:   .:|...:|....|.|..|.:...:.|||                               .
  Fly  2265 LI---RILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDF 2326

  Fly  1036 AFSDDS----------------YTTSV---------PESMEANSTLKLIQI-VNSKTSGDGPPAF 1074
            :.|:|:                |:.:|         |....|..|:.::.| .|..|..|.|...
  Fly  2327 SISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLA 2391

  Fly  1075 RC--EFVSGNGGGI------------------------------FNLSSADHGCNLLLIQPLDFE 1107
            |.  ..|..|||.:                              .|.||.|    :.|::|||.|
  Fly  2392 RVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGD----IALLKPLDRE 2452

  Fly  1108 NKSSYSLQLRLTSHRYFVNPLKDTTSVEIIVQDENDNAPEFEFNRLRGQQDTFYTVVTEEMDVDT 1172
            .:|.|:  |.|.:......||..|..|.:.|||.|||.|.||.       .:::..|.|.:...|
  Fly  2453 QQSEYT--LTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFEL-------QSYHATVRENLPSGT 2508

  Fly  1173 TILQVRATDRDSGKFGTVRYTLYDDDENRVNMPTSFFMMSEDTGVLRTAKHFKNENDFPLTFLVE 1237
            .:|..||||:|.|....:|:.|..:..:|       |.:..:||.:.||.....|........:.
  Fly  2509 HVLTPRATDKDEGLNAKLRFNLLGEHMHR-------FHIDSETGEISTATTLDREETSVYHLTLM 2566

  Fly  1238 ARDSDGQEQGSHRTRARIVVNKLADINRMALSFPNAAPSDLRNYYTELEELLDKKTGLVSGIERM 1302
            |:||...|..:......|.|   :|:|      .|....|...|...:.|.:.|.. .|.|...:
  Fly  2567 AQDSSITEPRASSVNLTISV---SDVN------DNIPKFDSTTYNVAVPERISKGE-FVFGARAL 2621

  Fly  1303 SSQKYLAKNGSVIENPAATDIWFYLIDPKTEQLVSRK----------DSIVETTLLEP------- 1350
            ....  .:|..|....:..|..::.|:.|| .:||.|          |.:..|.::..       
  Fly  2622 DLDD--GENAVVHYTISGRDQHYFDINTKT-GVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQS 2683

  Fly  1351 -AARSELNIAL------------------------PRATAENISFPLERKEHVHKVKAAVAIDNE 1390
             ::::||.:.|                        |......:|....:|..|.|::.|:|    
  Fly  2684 LSSKAELTVILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIA---- 2744

  Fly  1391 VFPFTLIAISLVI------LILGTIGIIY----ICISWSKYKNFKQRMRQYSSTNPPRYDPVIVN 1445
               ..::..||.:      |.:|..|:.|    :...|         :.......|......::.
  Fly  2745 ---GGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIW---------IEAADGDTPSLRSVTLIT 2797

  Fly  1446 QQASSASETIANMKE--YETQMLAMAVPPDV-------DDD----------LQLDFSAK------ 1485
            ...:.|::....|::  |..::|....||.:       |.|          ||.||...      
  Fly  2798 LNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEITES 2862

  Fly  1486 ---------------NHAFSLDNVSYITHKENTNGGGQSSPSHSDATTATIATLRRHKNLNNASM 1535
                           ::||.::.|.            |..| |...|.:.:..|           
  Fly  2863 GEIYTRMRLDREEIGDYAFVVEAVD------------QGVP-HMTGTASVLLHL----------- 2903

  Fly  1536 NNNLAINNRQNTFNRTLEMNTRNNANPLASPPNGALSGTLTLGRIKHQNSNHYQNGA--YNIDPT 1598
               |..|:....|.|...:|...||. :.|......|..|.||...:.:.:..:|..  :.|:|.
  Fly  2904 ---LDKNDNPPKFTRLFSLNVTENAE-IGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQ 2964

  Fly  1599 GPN 1601
            ..|
  Fly  2965 SGN 2967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad99CNP_001189311.1 Cadherin_repeat <68..138 CDD:206637 14/98 (14%)
Cadherin_repeat 146..259 CDD:206637 33/112 (29%)
Cadherin_repeat 280..383 CDD:206637 29/105 (28%)
Cadherin_repeat 393..496 CDD:206637 26/116 (22%)
Cadherin_repeat 518..594 CDD:206637 30/189 (16%)
Cadherin_repeat 608..699 CDD:206637 26/91 (29%)
Cadherin_repeat 710..802 CDD:206637 31/95 (33%)
Cadherin_repeat 814..903 CDD:206637 23/126 (18%)
Cadherin_repeat 915..1005 CDD:206637 26/95 (27%)
Cadherin_repeat 1041..1144 CDD:206637 36/160 (23%)
Cadherin_repeat 1159..1264 CDD:206637 26/104 (25%)
ftNP_477497.1 Cadherin_repeat 71..152 CDD:206637
Cadherin_repeat 163..266 CDD:206637
Cadherin_repeat 275..378 CDD:206637
Cadherin_repeat 393..490 CDD:206637
Cadherin_repeat 498..594 CDD:206637
Cadherin_repeat 603..704 CDD:206637
Cadherin_repeat 735..814 CDD:206637
Cadherin 843..>907 CDD:278457
Cadherin 950..1026 CDD:278457
Cadherin_repeat 1053..1149 CDD:206637
Cadherin_repeat 1157..1274 CDD:206637 17/115 (15%)
Cadherin_repeat 1282..1380 CDD:206637 34/113 (30%)
Cadherin_repeat 1390..1485 CDD:206637 29/105 (28%)
Cadherin_repeat 1497..1597 CDD:206637 26/114 (23%)
Cadherin_repeat 1621..1699 CDD:206637 10/77 (13%)
Cadherin_repeat 1720..1818 CDD:206637 22/97 (23%)
Cadherin_repeat 1827..1918 CDD:206637 27/92 (29%)
Cadherin_repeat 1926..2023 CDD:206637 31/98 (32%)
Cadherin_repeat 2031..2162 CDD:206637 23/133 (17%)
Cadherin_repeat 2172..2274 CDD:206637 27/105 (26%)
Cadherin_repeat 2282..2380 CDD:206637 12/97 (12%)
Cadherin_repeat 2388..2487 CDD:206637 27/104 (26%)
Cadherin_repeat 2495..2592 CDD:206637 27/112 (24%)
Cadherin_repeat 2600..2694 CDD:206637 18/97 (19%)
Cadherin_repeat 2710..2806 CDD:206637 16/111 (14%)
Cadherin_repeat 2814..2909 CDD:206637 20/121 (17%)
Cadherin_repeat 2917..3009 CDD:206637 12/52 (23%)
Cadherin 3018..3114 CDD:278457
Cadherin 3129..3220 CDD:278457
Cadherin_repeat 3233..3330 CDD:206637
Cadherin_repeat 3338..3434 CDD:206637
Cadherin_repeat 3443..3541 CDD:206637
Cadherin_repeat 3550..3647 CDD:206637
Cadherin_repeat 3657..3753 CDD:206637
EGF 4017..4047 CDD:278437
EGF_CA 4056..4090 CDD:238011
EGF_CA 4094..4128 CDD:238011
Laminin_G_1 4156..4306 CDD:278483
LamG 4428..4543 CDD:238058
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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