DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad99C and Fat4

DIOPT Version :10

Sequence 1:NP_733314.1 Gene:Cad99C / 43528 FlyBaseID:FBgn0039709 Length:1706 Species:Drosophila melanogaster
Sequence 2:NP_001401971.1 Gene:Fat4 / 310341 RGDID:1564291 Length:4981 Species:Rattus norvegicus


Alignment Length:1883 Identity:479/1883 - (25%)
Similarity:743/1883 - (39%) Gaps:435/1883 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SAVLGKSQMCEVETGQTNIILDIEESRESFIGQPTTPPELPI---FGDPDTEIALNLVFPKGQPI 85
            |:...::|..|||.    .:.||.::...|   ||...:|.:   .||                 
  Rat  1715 SSAFPRTQRAEVEI----TLQDINDNPPVF---PTDTLDLTVEENIGD----------------- 1755

  Fly    86 FQLNGKKLQLLQPLDRDEENLSHIVF-----------------QVSCTTRSTGKKRT-------- 125
                |.|:..|..:|.||...:.:.:                 .:..|.|...:.|:        
  Rat  1756 ----GSKIMQLTAMDADEGANALVTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1816

  Fly   126 --------IPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFI 182
                    :.|.:.:||:||:.|||....|...:||.|..|:.: ..|.|.|.|:||||.:.|.:
  Rat  1817 DDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLV-AAILATDDDSGVNGEISYVV 1880

  Fly   183 AEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTYYLTIVASDRARNTADRLSST 247
            .|.            ||.|.|.:: |..|...:.:.||:|:.|.|.||:.|.|..       ...
  Rat  1881 EED------------DGDGVFFLN-PVTGVFNLTRALDYERQQYYILTVRAEDGG-------GQF 1925

  Fly   248 TTLTV--NIADSNDLDPSFIYSGCVSLDGACINPEYSAS----VPAGSLLGVLTVLPERIQAVDL 306
            ||:..  ||.|.||..|.|..|            .||.|    :|.||     |||...:...| 
  Rat  1926 TTIRAYFNILDINDNPPVFSLS------------SYSTSLMENLPLGS-----TVLVFNVTDAD- 1972

  Fly   307 DTINSPIRYSFASGMPGNYADYFQIDESTGVLKQTKAVDTSTAKKYDIIVKAEEV-SPGPQRFT- 369
            |.:||.:.||.||   |:....|.:|:. ||||..||:|..:...|:::::..:: .|...||| 
  Rat  1973 DGVNSQLSYSIAS---GDSLGQFAVDKH-GVLKALKALDRESQSFYNLVIQVHDLPQPPASRFTS 2033

  Fly   370 TAKLEIFVKPVDANPPVISSSQAEGYVDENSPIGTRVLDAHGNPISFMTTDADLSDSDPKPDYIY 434
            ||::.|.:..|:.|||:..|.:.. |:.||:||.|.|..|       ..||   .||.|.....|
  Rat  2034 TAQVSIILLDVNDNPPMFLSPKLT-YIPENTPIDTVVFKA-------QATD---PDSGPNSYIEY 2087

  Fly   435 ELTTPSFNV----TGDGILVVNEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVND 495
            .|..|:.|.    |.||.:.:..| |||:..:  .:...|||.:......|:...:.|.:.|:||
  Rat  2088 TLLNPAGNKFSIGTIDGEVHLTGE-LDREEVS--NYSLTVVATDKGQPPLSSSTEVVVMVLDIND 2149

  Fly   496 NAPKLA------MVAPISITAGDQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINA 554
            |.|..|      .:...::|..|      :.||:|.|||||.|..|.|.|  |..|..|:|.|::
  Rat  2150 NNPVFAQAMYRVQIKENTLTGTD------IIQVSAADNDEGTNGQVRYGI--VGGNTHQEFRIDS 2206

  Fly   555 TTGEIRTQGRLLAGE---QYSITVQATDIGGLSSQAIVEVSVT-PGPNTKPPRFQKPIYEVQVSE 615
            .||.| |..:.|..|   .|.:||||||.|.........|::| ...|...|.|:...|.|.|.|
  Rat  2207 VTGAI-TVAKSLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270

  Fly   616 --GAEINSTVTVVHAEDPE--NDAVVYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRYQLIL 676
              ||...:.:.||..:|.:  |..:.|.::.||:...||: ..||.:.|.:.||||:...:.|::
  Rat  2271 NLGALPRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFAL-TASGELRVTQSLDREARDHFVLVV 2334

  Fly   677 KAEDTG--GLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINAE 739
            .|.|.|  .|:.:.|:||.|.||||..|.| ||.:.:....|:......|.:|:|:|||...||.
  Rat  2335 TAADAGSPALTGTGTINIIVDDINDNVPTF-ASNMYFTAIPEDAPTGTDVLLVNASDADAATNAV 2398

  Fly   740 ITYS-IPTDIPFTINATSGEILTAKELDYEQLNEYKFVVTAKD-GAPDARLGTASVTVMVLDLPD 802
            |:|| |..:..||||.::|:|:|:..||.|..:.|..||.|.| |:|::...:.||.|.|.|:.|
  Rat  2399 ISYSIIGGNSQFTINPSTGQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVSVTDVND 2463

  Fly   803 EVPKFSDARIDVHIPE-NEENFLVATVQAFDPDSMP--EITYVLRKGNAELFKVSEKSGEVRTIK 864
            ..|:|.......|||. ......|..|...|.|..|  |:.|.|...|:|.|.:....|.:....
  Rat  2464 NPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHIDPLRGAIMAAG 2528

  Fly   865 GLDYESQKQHQLTIGTIENDGNG--PGDTILLVVDVEDRNDLPPRFITVPDPVTVNDDQGIGTII 927
            .|...|    ::|......||..  ..|:..:.|...::.|. |:...........::|.:||::
  Rat  2529 PLSGAS----EVTFSVHVKDGGSFPKTDSTTVTVRFANKADF-PKVRAKEQTFMFPENQPVGTLV 2588

  Fly   928 ATLPAIDGDGTS-PGNVVRYEIVGRGKAPKYFQVDPDTGAVRIRDELRKEEDTEYQVDIRAYDLG 991
            .|:     .|:| .|..:.|.|.. |.....||:||.||.|.|...|..|:..:|.|.|.|.|.|
  Rat  2589 TTI-----TGSSLRGETLSYYIAS-GNLGNAFQIDPLTGQVSISQPLDFEKIQKYIVWIEARDGG 2647

  Fly   992 EPQLSSVAPLRVDVHHLLSSGNNEIKLDNKLESGTGMSSESIGLAFSDDSYTTSVPESMEANSTL 1056
            .|..||...|.:.|   |...:|                   ..||.:|.:.:.:.|::   |..
  Rat  2648 FPPFSSYEKLDITV---LDINDN-------------------APAFEEDPFVSEILENL---SPR 2687

  Fly  1057 KLIQI-VNSKTSG-DGPPAFRCEFVSGNGGGIFNLSSADHGCNLLLIQPLDFENKSSYSLQLRLT 1119
            |::.: ...|.|| :|..|:  |.|:||....|.::.|..  .:..|:|||.|..|.|.|.::.:
  Rat  2688 KILTVSATDKDSGPNGQLAY--EIVNGNQESSFTINHATG--EIRSIRPLDREKISYYELTVKSS 2748

  Fly  1120 SHRYFVNPLKDTTSVEIIVQ--DENDNAPEFEFNRLRGQQDTFYTVVTEEMDVDTTILQVRATDR 1182
            ...   :| ..:|||::|:.  |||||||.|        ...|...|:|...:..|:.:|..:|.
  Rat  2749 DKG---SP-SQSTSVKVIISVLDENDNAPRF--------SQIFSAYVSENSPLGYTVTRVTTSDE 2801

  Fly  1183 DSGKFGTVRYTLYDDDENRVNMPTSFFMMSEDTGVLRTAKHFKNENDFPLTFLVEARDSDGQEQG 1247
            |.|.....||::.|     ..:|   |.::.:||.:..::....|:.......|.|.||..    
  Rat  2802 DIGINAISRYSIAD-----TALP---FTINPNTGDIVISRPLNREDTDRYRIRVSAHDSGW---- 2854

  Fly  1248 SHRTRARIVVNKLADINRMALSFPNAAPSDLRNYYTELEELLDKKTGLVSGIERMS-SQKYLAKN 1311
               |.:..|...:.|||.....|  :.||    ||.:..||    |.|.|.:.::| :......|
  Rat  2855 ---TVSTDVTIFVTDINDNTPRF--SRPS----YYLDCPEL----TELGSRVTQVSATDPDEGSN 2906

  Fly  1312 GSVIENPAATDIWFYLIDPKTEQL---------------------------VSRKDSIV------ 1343
            |.|          ||.|..|:|..                           ::|...||      
  Rat  2907 GQV----------FYFIKSKSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTASDRG 2961

  Fly  1344 ------ETTL-------------------LEPAARS-ELNIALPRATA---------ENISFPLE 1373
                  |||:                   ..|..:: ::...|.:.||         ..:.:.:.
  Rat  2962 NPSLLSETTVTINTVDSNDNPPQFLKNKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVS 3026

  Fly  1374 RKEHVHKVKAAVAIDNEVFPFTLIAISLVILILGTIGIIYICISWSKYKNFKQRMRQYSSTNPPR 1438
            ...|:.|.|    :||:.               |.|.|....:| ...:||..|:......|||.
  Rat  3027 NGNHLGKFK----LDNDT---------------GWISIASSLVS-DLNQNFFIRVTAKDKGNPPL 3071

  Fly  1439 YDPVIVNQQASSASETIANMKEYETQMLAMAVPPDVD-DDLQLDFSAKNHAFSLDN-VSYITHKE 1501
            ...|:::   .:.:|...:..|:....::..:|.... ..:....||::...:::. :||     
  Rat  3072 SSQVVIH---ITVTEENYHTPEFSQSHISATIPESHSIGSVVRTVSARDRDTAMNGLISY----- 3128

  Fly  1502 NTNGGGQSSPSHSDATTATIATLR--------RHKNLNNASMNNNLAINNRQNTFNRTLEMNTRN 1558
            |.:.|.:......:::|..:...:        :|:...:|:....:|   |....:.|:.:...|
  Rat  3129 NISSGNEEGIFAINSSTGVVTLAKALDYELSSKHEMTISATDGGWVA---RTGYCSLTVSVIDVN 3190

  Fly  1559 NANPLASPP-------NGALSGTLTLGRIKHQNSNHYQNGA---------------YNIDP-TG- 1599
            :.:|:..|.       ..|.|||..:    |.|:....:||               :.||| || 
  Rat  3191 DNSPVFVPDEFFPTVMENAPSGTTVI----HLNATDADSGANAVIAYTVQSSDSDLFVIDPNTGV 3251

  Fly  1600 ----------PNNMAHAKNNAYSTMGRRGNTFGDVGL-LNGNGELMNATLGRNGQLNNRLYGGEV 1653
                      .....|....|::.......:|..|.: |.|..|.:       .:..::||..||
  Rat  3252 ITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVNIQLMGTNEYV-------PRFVSKLYYFEV 3309

  Fly  1654 PITNPLFQRSNSDHNHLSSTNENVSFGKRDY-----------------GQIGFSYLNDLDRSE 1699
            ....|   |..:.....:|..:..:.|:..|                 |||..|.|.|.::.|
  Rat  3310 SEAAP---RGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQIHKMTGQIYVSGLLDREKEE 3369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad99CNP_733314.1 CA_like 68..140 CDD:481204 15/104 (14%)
Cadherin_repeat 146..259 CDD:206637 35/114 (31%)
Cadherin_repeat 280..383 CDD:206637 36/108 (33%)
Cadherin_repeat 393..496 CDD:206637 31/106 (29%)
Cadherin_repeat 518..594 CDD:206637 32/78 (41%)
Cadherin_repeat 608..699 CDD:206637 33/96 (34%)
Cadherin_repeat 710..802 CDD:206637 35/93 (38%)
Cadherin_repeat 814..903 CDD:206637 22/93 (24%)
Cadherin_repeat 915..1005 CDD:206637 30/90 (33%)
Cadherin_repeat 1041..1144 CDD:206637 30/106 (28%)
Cadherin_repeat 1159..1264 CDD:206637 23/104 (22%)
Fat4NP_001401971.1 Cadherin_repeat 48..131 CDD:206637
Cadherin_repeat 139..246 CDD:206637
Cadherin_repeat 254..349 CDD:206637
Cadherin_repeat 364..471 CDD:206637
Cadherin_repeat 479..577 CDD:206637
Cadherin_repeat 588..685 CDD:206637
Cadherin_repeat 693..789 CDD:206637
Cadherin_repeat 798..889 CDD:206637
Cadherin_repeat 904..992 CDD:206637
Cadherin_repeat 1000..1096 CDD:206637
Cadherin_repeat 1105..1206 CDD:206637
Cadherin_repeat 1215..1311 CDD:206637
Cadherin_repeat 1321..1416 CDD:206637
Cadherin_repeat 1428..1525 CDD:206637
Cadherin_repeat 1540..1622 CDD:206637
Cadherin_repeat 1634..1736 CDD:206637 7/24 (29%)
Cadherin_repeat 1747..1837 CDD:206637 16/110 (15%)
Cadherin_repeat 1845..1940 CDD:206637 36/115 (31%)
Cadherin_repeat 1948..2047 CDD:206637 36/108 (33%)
Cadherin_repeat 2057..2150 CDD:206637 31/106 (29%)
Cadherin_repeat 2159..2254 CDD:206637 35/103 (34%)
Cadherin_repeat 2263..2360 CDD:206637 34/97 (35%)
Cadherin_repeat 2369..>2443 CDD:206637 28/73 (38%)
Cadherin_repeat 2472..2559 CDD:206637 21/90 (23%)
Cadherin_repeat 2573..2667 CDD:206637 32/102 (31%)
Cadherin_repeat 2675..2771 CDD:206637 30/106 (28%)
Cadherin_repeat 2778..2870 CDD:206637 25/106 (24%)
Cadherin_repeat 2878..2981 CDD:206637 23/120 (19%)
Cadherin_repeat 2990..3085 CDD:206637 21/117 (18%)
Cadherin_repeat 3095..3192 CDD:206637 14/104 (13%)
Cadherin_repeat 3200..3295 CDD:206637 19/98 (19%)
Cadherin_repeat 3305..3402 CDD:206637 15/68 (22%)
Cadherin_repeat 3410..3508 CDD:206637
Cadherin_repeat 3516..3612 CDD:206637
EGF_CA 3804..3862 CDD:238011
EGF_CA 3864..3900 CDD:238011
EGF_CA 3902..3938 CDD:238011
EGF_CA 3941..3976 CDD:238011
LamG 3979..4142 CDD:238058
EGF_CA 4168..4200 CDD:238011
Laminin_G_2 4252..4375 CDD:460494
EGF_CA 4430..4464 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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