Sequence 1: | NP_001189311.1 | Gene: | Cad99C / 43528 | FlyBaseID: | FBgn0039709 | Length: | 1706 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031761776.1 | Gene: | pcdh15 / 100494111 | XenbaseID: | XB-GENE-986760 | Length: | 1715 | Species: | Xenopus tropicalis |
Alignment Length: | 1753 | Identity: | 489/1753 - (27%) |
---|---|---|---|
Similarity: | 793/1753 - (45%) | Gaps: | 301/1753 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 CEVETG---QTNIILDIEESRESFI----------GQPTTPPELPIFGDPDTEIALNLVFPKGQP 84
Fly 85 IFQLNGKKLQLLQPLDRD-EENLSHIVFQVSCTTRSTGK--KRTIPIIVRVSDINDNAPRFMNTP 146
Fly 147 YEVTVPESTPVGTTIFRNIQ----ALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISF 207
Fly 208 PHQGQVTVAKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSL 272
Fly 273 DGA--CINPEYSASVP---AGSLLGVLTVLPERIQAVDLDTINSP------IRYSFASGMPGNYA 326
Fly 327 DYFQIDESTGVLKQTKAVDTSTAKKYDIIVKAEEVSPGPQRFTTAKLEIFVKPVDANPPVISSSQ 391
Fly 392 AEGYVDENSPIGTRVLDAHG--NPISFMTTDADLSDSDPKPDYIY-ELTTPSFNVTGDGI--LVV 451
Fly 452 NEENLDRDPPAPGRFKFQVVAREPRTNAASAPLSLTVHLRDVNDNAPKLAMVA-----PISITAG 511
Fly 512 DQSESRLVTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTG--EIRTQGRLLAGEQYSIT 574
Fly 575 VQATDIGGL----SSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPENDA 635
Fly 636 VVYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRYQLILKAED--TGGLSSSATVNIKVTDIN 698
Fly 699 DKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINAEITYSIPT-DIPFTINATSGEILTA 762
Fly 763 KELDYEQLNEYKFVVTAKDGAPDARLGTASVTVMVLDLPDEVPKFSDARIDVHIPENE-ENFLVA 826
Fly 827 TVQAFDPDSMPEITYVLRKGNA-ELFKVSEKSGEVRTIKGLDYE----SQKQHQLTIGTIENDGN 886
Fly 887 GPGDTILLVVDVEDRNDLPPRF-------ITVPDPVTVNDDQGIGTIIATLPAIDGD--GTSPGN 942
Fly 943 VVRY--EIVGRGKAPKYFQVDPDTGAVRIRDELRKEEDTEYQVDIRAYDLGEPQLSSVAPLRVDV 1005
Fly 1006 HHLLSSGNNEIKLDNKLESGTGMSSESIGLAFSDDSY-TTSVPESMEANSTLKLI-------QIV 1062
Fly 1063 NSKTSGDGPPAFRCEFVSGNGGGIFNLSSADHGCNLLLI-QPLDFENKSSYSLQLR-----LTSH 1121
Fly 1122 RYFVNPLKDTTSVEIIVQDENDNAPEFEFNRLRGQQDTFYTVVTEEMDVDTTILQVRATDRDSGK 1186
Fly 1187 FGTVRYTLY-----DDDENRVNMPTSFFMMSEDTGVLRTAKHFKNENDFPLTFLVEARDSDGQEQ 1246
Fly 1247 GSHRTRARIVVNKLADINRMALSFPNAAPSDLRNYYTELEELL-----DKKTGLVSGIERMSSQK 1306
Fly 1307 YLAKNGSVIENPAATDIWFYLIDPKTEQLVSRKD--SIVETTLLEPAARSE---------LNIAL 1360
Fly 1361 PRATAENISFPLERKEHVHKVKAAVAIDNEVFPFTLIAISLVILILGTIGIIYICISWSKYKNFK 1425
Fly 1426 QRMRQYSSTNPPRYDPVI-VNQQASSASETI------ANMKEYETQMLAMAVPPDV--DDDLQL- 1480
Fly 1481 ------------DFSAKNHAFSLDNVS-----------YITHKE--NTNGGGQSSPSHSDATTAT 1520
Fly 1521 IATLRRHK-----NLNNASMNNNLAINNRQNTFNRTLEMNTRNNAN-PLASPPNGA--------- 1570
Fly 1571 -----LSGTLTLGR---------IKHQNS---NHYQNGAYNIDPTGPNNMAHAKNNAYSTMGR 1616 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad99C | NP_001189311.1 | Cadherin_repeat | <68..138 | CDD:206637 | 21/72 (29%) |
Cadherin_repeat | 146..259 | CDD:206637 | 45/116 (39%) | ||
Cadherin_repeat | 280..383 | CDD:206637 | 35/111 (32%) | ||
Cadherin_repeat | 393..496 | CDD:206637 | 27/107 (25%) | ||
Cadherin_repeat | 518..594 | CDD:206637 | 29/81 (36%) | ||
Cadherin_repeat | 608..699 | CDD:206637 | 35/92 (38%) | ||
Cadherin_repeat | 710..802 | CDD:206637 | 37/92 (40%) | ||
Cadherin_repeat | 814..903 | CDD:206637 | 27/94 (29%) | ||
Cadherin_repeat | 915..1005 | CDD:206637 | 29/93 (31%) | ||
Cadherin_repeat | 1041..1144 | CDD:206637 | 32/116 (28%) | ||
Cadherin_repeat | 1159..1264 | CDD:206637 | 30/109 (28%) | ||
pcdh15 | XP_031761776.1 | ECD | 34..143 | CDD:408229 | 29/117 (25%) |
Cadherin_repeat | 155..263 | CDD:206637 | 45/115 (39%) | ||
CA | 308..396 | CDD:214520 | 29/88 (33%) | ||
Cadherin_repeat | 402..508 | CDD:206637 | 27/109 (25%) | ||
Cadherin_repeat | 516..612 | CDD:206637 | 33/103 (32%) | ||
Cadherin_repeat | 624..>696 | CDD:206637 | 25/71 (35%) | ||
Cadherin_repeat | 725..818 | CDD:206637 | 37/93 (40%) | ||
Cadherin_repeat | 826..924 | CDD:206637 | 27/97 (28%) | ||
Cadherin_repeat | 934..1030 | CDD:206637 | 32/126 (25%) | ||
Cadherin_repeat | 1048..1143 | CDD:206637 | 31/110 (28%) | ||
Cadherin_repeat | 1156..1246 | CDD:206637 | 30/100 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 65 | 1.000 | Domainoid score | I9922 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H23401 | |
Inparanoid | 1 | 1.050 | 491 | 1.000 | Inparanoid score | I1379 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D15091at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005384 | |
OrthoInspector | 1 | 1.000 | - | - | oto104004 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5325 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.090 |