DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prtl99C and ProtA

DIOPT Version :10

Sequence 1:NP_651735.3 Gene:Prtl99C / 43526 FlyBaseID:FBgn0039707 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_477050.1 Gene:ProtA / 34866 FlyBaseID:FBgn0013300 Length:146 Species:Drosophila melanogaster


Alignment Length:94 Identity:27/94 - (28%)
Similarity:46/94 - (48%) Gaps:14/94 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEYCPPIYKRQKVARVTNNGYLNFMTEYKKRFYGLSPQDMVHYAAKQWTQLSMAEKEAFKSKKPS 72
            |..|.|..|..|...||||.||||:..::|:...|.|::::..|||.|.:||...|:.::.    
  Fly    66 KVKCAPRQKCSKQGPVTNNAYLNFVRSFRKKHCNLKPRELIAKAAKAWARLSENRKDRYRR---- 126

  Fly    73 TITLKSPAQYVACEMKSDVAGGQQSSCQR 101
                      :||::.:.....::..||:
  Fly   127 ----------MACKVTTSERHKRRRICQQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prtl99CNP_651735.3 Protamine_like 1..125 CDD:283927 27/94 (29%)
ProtANP_477050.1 Protamine_like 60..146 CDD:283927 27/94 (29%)

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