DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neo and CG17111

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster


Alignment Length:800 Identity:167/800 - (20%)
Similarity:272/800 - (34%) Gaps:224/800 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NRTERP--VENVETRNSGFDLPAASDLSSSLGSEEDSIYYDNAPVDCNPELVGFEIVTGYVFSAP 131
            ||...|  |.|.:|||...:||                                      |....
  Fly    61 NRIYGPEMVSNFKTRNGQQELP--------------------------------------VSQVC 87

  Fly   132 EKLMDSQPGTLMLTDCLDTCRKNKTCQSVNYETGLCVLFSAHADQLPGALTKSQFPVF----TIY 192
            .::.:..|..:.....|||    ..|...:|       |...:..|   ....:.|:.    .::
  Fly    88 WRICNEDPDCIAYVHLLDT----DECHGYSY-------FERTSRYL---AISGELPLVADGEAVF 138

  Fly   193 AQKSCLAVKPC--SRAWYVDRVQNYKLKTEVKRTVS-VASRRECFELCLGENDFTCRSANY---- 250
            .:|:||.|...  .|.|.:.::....|....|:|:| :.:||||.|.|..|..|.|.||::    
  Fly   139 YEKTCLRVPDACRGRLWALTKIPGSTLVYHSKKTISTLVTRRECAERCFFETQFRCLSASFAPSY 203

  Fly   251 --------------DRTS---GACELSELDRLTLAGSQAFQVND-GSDYLENHC----VDEPNKL 293
                          .|.|   |.|.||:.|:  .....||:... ..:|:||.|    ::..|  
  Fly   204 RNNRERFRGEAGPGQRPSPRLGRCMLSDRDK--TVQPDAFRAAPYDEEYMENQCHERAIESDN-- 264

  Fly   294 CEFKRLPGRILKTVDSVYQEVS----SIDECRELCLN-SPYRCHS---YDYNDTGDMVCRLSHHS 350
            |.::     :......:|.|..    |..||:.:|.: :.:.|..   |..|......|.|  ||
  Fly   265 CSYE-----LYANSSFIYAEARYLGLSQKECQAMCSHEAKFYCQGVSFYYVNQLSLSECLL--HS 322

  Fly   351 RATLADVQEPFLEVPEASTY-ELTSCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSC---- 410
            . .:..:....|::.|.|.| ....|.:|.:.|...:|..:......|.||:||....|.|    
  Fly   323 E-DIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKDWFVGKIYASMHSKDCLARG 386

  Fly   411 ----SVDVKSALDFELRMNYHDLECNV------RQSTAGRYVND-IIIQHHDMIVTSSDLGLALA 464
                ||.:...:..|::.|    .|.:      .|.....:::. ::||::..:.|..|..:.:.
  Fly   387 SGNGSVLLTLQIGSEVKEN----RCGILRAYEMTQEYQRTFISALVVIQNNPNVQTQGDRLIKVG 447

  Fly   465 CQYDLTNKSVSNGVDL-DVRGDIMPALSEEVIVES--------------------------PNVI 502
            |..  :|.:.|.||.: |...|....:...:.:||                          |::.
  Fly   448 CIQ--SNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEHMFPHEGVVHYNSSTGPHPHPSIS 510

  Fly   503 MRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIF--------------IRELVAMDGVDNSE 553
            ::|............::|..|.|  :||.|.||.::.              ...|||....:.:.
  Fly   511 LQILDLSHQHETNDVQIGQNLEL--QIVAEYSPQQLAEHMELQLAPLPDFRATSLVAKTADNENF 573

  Fly   554 ITLIDSNGCPTDHFIMGPIYK-GSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCMPSCEPVQCEQ 617
            :.|||..|||||..:...:.: .:.|..||.:.|.||||..:..|.|...:..|:..|.|..|..
  Fly   574 VLLIDERGCPTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVKIRFCVERCSPSNCIS 638

  Fly   618 EDTSGEFRSLLSYGRKRRSLNTTDDHPRPRR-----DIDTSKKSAPSDMLLVQSIQITDKFGFKQ 677
            .          |:.|:||..:..|..|...|     .|.|....||.          .|.|...|
  Fly   639 S----------SWQRRRRQADQPDRRPEDLRVQNPVYISTVVDVAPQ----------PDNFTRSQ 683

  Fly   678 D--------KQESGDFYDGNETTFTANEEG-------------HGFCVNAIGLITAATIFLLTQL 721
            :        :....|  ..|..::...|.|             ...|:|...||.....:|:.|:
  Fly   684 EELPLNYNIRVHGPD--QSNTNSYLYGERGVLLIAGIDDPLHLDNVCINQSLLIALFIFWLICQV 746

  Fly   722 AVI---AIWTYCYQRRQKLQ 738
            |::   .:....|:|..||:
  Fly   747 ALLFGCGMVLQRYRRLAKLE 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 11/80 (14%)
PAN_AP_HGF 211..285 CDD:238532 26/96 (27%)
PAN_1 294..373 CDD:278453 18/87 (21%)
ZP 381..615 CDD:214579 62/290 (21%)
CG17111NP_651119.2 PAN_1 159..255 CDD:278453 27/97 (28%)
PAN_AP_HGF 270..344 CDD:238532 17/76 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005301
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.