DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neo and sle

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_731472.1 Gene:sle / 41262 FlyBaseID:FBgn0037810 Length:1430 Species:Drosophila melanogaster


Alignment Length:879 Identity:163/879 - (18%)
Similarity:260/879 - (29%) Gaps:286/879 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EHLRIRRQAAESV--------TAAAPNASK----VMASEEIKDKTEWPGAKETSTEINRTERPV- 75
            |.||:.....|..        |...|...:    |....|||.|||.|         .:.|.|: 
  Fly   316 ETLRVESPKVERKIETLQKVHTVGTPEIKEKDEPVGVDNEIKTKTETP---------QKIEPPII 371

  Fly    76 -ENVETR--------NSGFDLP---AASDLSSSLGSEEDSIYYDNAPVDCNPELVGFEIVTGYVF 128
             ..|||:        ....|.|   :..||..: ..|:|....|...:|....:|..|..|....
  Fly   372 ESKVETQQLIDHPQIEKKRDTPQNVSTVDLMDT-SPEKDESMEDQEFLDAEDSIVQLEPQTDEPV 435

  Fly   129 SAPEKLM-----DSQP-------------GTLMLTDCLDTCRKNK---------------TCQSV 160
            ..|::|.     |.:|             ..:...|.:|..::||               ..:|.
  Fly   436 EKPKELEFVDLDDDEPVFPSEAPKYVEDSKEVHPDDSMDDDKQNKIDVTEVIHLPSIRARAVRSP 500

  Fly   161 NYETGLCVLFSAHADQL----------PGALTKSQFPVFTIYAQK-------------------- 195
            ..|....|.|:...|.|          ||   :.:.||..|...|                    
  Fly   501 AVEQKKSVDFNNDTDDLEVEKKRFPKTPG---REKVPVCRILTPKPETPLKLALQKGRNSSTPIL 562

  Fly   196 -------------------SCLAVKPCSRAWYVDRVQNYKLKTEV---------KRTVSVASRRE 232
                               ...|:||      .|.:::...|.|:         |....:.:|.|
  Fly   563 KDQERGLSNSTEELHPAPPQIDAIKP------FDELESKNAKDEMVEQSPMSKQKAENKILARLE 621

  Fly   233 CFELCLGEN--------------------DFTCRSANYDRTSGACELSELDR------LTLAGSQ 271
            .||..:.::                    |.....|..|..||....|.|.|      :.:.|..
  Fly   622 SFEEDVEDHGNEEENEEEHEEDKSISEFVDLEAEDAGKDYMSGDSMDSSLRREMEENEIPIDGES 686

  Fly   272 AF---------QVNDGSDYL---ENHCVDEPNKLCEFKRLPGRILKTVDSVYQEVSSIDECRELC 324
            ..         :.:||.|..   :|...::..:|| :......|....:|...|.||:.. |.:.
  Fly   687 VGSKDTEESTPEESDGDDSFIVSDNEDEEDLGQLC-YSSGEDEIEDAEESEQAERSSVKR-RRII 749

  Fly   325 LNSPY------RCHSYD---YNDTGDMVCRLSHHSRATLADVQEPFLEVPEASTYELTSCYNVTI 380
            :.||.      :..|.|   .|.|.....:.:..|.|:........|.|.|    |.:|.....:
  Fly   750 IASPSDEEHDGKVQSNDDSSENKTEKPKNQSNCSSNASKLSEAAQLLNVSE----EKSSISETEL 810

  Fly   381 ECGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSALD---FELRMNYHDLECNVRQSTAGRYV 442
            |......|..:..|:.||              ..::.||   .|:..:.||.|            
  Fly   811 ERSRQVALNELNKSERFN--------------KTETQLDISVMEVDSSDHDEE------------ 849

  Fly   443 NDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALSE--EVIVESPNVIMRI 505
                 :..:.:...::..|     |::.:.......|.|......||.||  ..|.:|.:.:.::
  Fly   850 -----EKTEKVGAKNNRSL-----YEIVDSDDGEEQDQDQSDADKPAESENHSEIKKSTSFMDQM 904

  Fly   506 TSRDGS----DMMRSAEVGDPL-ALKFEIVDEQSPYEIFIRELVAMDGVDNSEITLIDSNGCPTD 565
            :...|:    ::|.|.|..||. |.|.|..|:..|.|      ......|....|.:.....|::
  Fly   905 SGAKGNKSVYEIMDSYETEDPKEAGKNEESDKDKPAE------NGKSDKDKQAETEMSDEDKPSE 963

  Fly   566 HFIMGPIYKGSVSGKMLLSNFD----AFKFPSSEVVQFRALVTPC---------MPSCEPV---- 613
              |..|    |...|.::|..|    ..:..||::.....:..|.         :||.|..    
  Fly   964 --IKSP----STIKKSIISTADEEALLAELASSDLSHLEKMFNPLQKSRRQSLHVPSPELAAKNP 1022

  Fly   614 ----QCEQEDTSGEFRSLLSY----GRKRRSLNTTDDHPRPRRDIDTSKKSAPSDM----LLVQS 666
                :.|:.:...:|....|:    ..|:|..|       .|:.:..|...||.|:    :..:.
  Fly  1023 KLRRRSERVEVGNDFCPSQSFVDMVAEKKRQKN-------KRKRLSKSLSGAPEDLEEMEIKHER 1080

  Fly   667 IQITDKFGFKQDKQESGDFYDGNETTFTANEEGH 700
            .::....|...|..|.    |....|.|..||.|
  Fly  1081 KRLKSSHGASTDSMEE----DNENETMTVAEEHH 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 22/158 (14%)
PAN_AP_HGF 211..285 CDD:238532 19/120 (16%)
PAN_1 294..373 CDD:278453 19/87 (22%)
ZP 381..615 CDD:214579 48/264 (18%)
sleNP_731472.1 MDN1 <289..716 CDD:227596 74/418 (18%)
MDN1 <685..960 CDD:227596 60/322 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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