DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and CG15020

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_647901.1 Gene:CG15020 / 38544 FlyBaseID:FBgn0035543 Length:604 Species:Drosophila melanogaster


Alignment Length:389 Identity:81/389 - (20%)
Similarity:151/389 - (38%) Gaps:68/389 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 TSCYNVTIECGGGDMLARIRTSKLFNGKVYAKG---SPKSCSVD--VKSALDFELRMN------Y 426
            |...::..||....|..||..:..|:|.:|:.|   .|....::  .:...:|.:::|      .
  Fly   215 TRVQHIEAECQDDYMKIRIGFNGSFSGLLYSAGYAYDPDCMYINGSGRDYYEFYIQLNRCGTLGK 279

  Fly   427 HDLECNVRQSTAGRYVNDIIIQHHDMIVTSSDLGLALACQ--YDLTNKSVSNGVDLDVRGDIMPA 489
            :.|:...|::......|.:.:|::.:|....|....:.|:  ||.........:|::|      |
  Fly   280 NSLQEESRKNPTNFMWNTVTVQYNPLIEEEYDEHFKVTCEYGYDFWKTVTFPFLDVEV------A 338

  Fly   490 LSEEVI--VESPNVIMRITSR---DGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGV 549
            ....|:  :..|...|.|.:.   .|..:.....|||||.|...:..:...::|.:.:..|.:|.
  Fly   339 TGNPVVFTLSPPECYMEIQNGYGIGGPRVTGPVRVGDPLTLIIYMRSKYDGFDIVVNDCYAHNGA 403

  Fly   550 DNSEITLIDSNGCPTDHFIMGPIYKGSVSGK-----MLLSNFDAFKFPSSEVVQFRALVTPCMPS 609
             |..|.|||.:|||.|..::.. ::||.|..     .:.:....|:|..|..:.....|..|...
  Fly   404 -NKRIQLIDQHGCPVDDKLISR-FRGSWSDSGVYETQVYAYMKTFRFTGSPALYIECDVRMCHGR 466

  Fly   610 CEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDID-----TSKKSAPS---DMLLVQS 666
            |....|       .:|:|.:..::..|..|..:...|....|     |...:|.|   ::.|.||
  Fly   467 CPSQPC-------HWRNLKAVTKRDTSNMTATNISIPPLSADGEGLTTESPTANSLSENVNLFQS 524

  Fly   667 IQITDKFGFKQDKQESGDFYDGNET-------------TFTANEEGHGFCVNAIGLITAATIFL 717
            :::     .::.:.:..|.|...:|             ||:|...|   | :|:..:...|:|:
  Fly   525 LRV-----LQEGETDGDDVYAHRQTKPLSPHQTCLKTSTFSALTAG---C-SAVLCVLTVTLFI 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635 81/389 (21%)
ZP 381..615 CDD:214579 56/256 (22%)
CG15020NP_647901.1 ZP 223..473 CDD:214579 57/264 (22%)
Blue background indicates that the domain is not in the aligned region.

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