DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-8

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001250721.1 Gene:cutl-8 / 3565740 WormBaseID:WBGene00013960 Length:625 Species:Caenorhabditis elegans


Alignment Length:371 Identity:77/371 - (20%)
Similarity:132/371 - (35%) Gaps:87/371 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IECGGGDMLARIRTSKLFNGKVYAKGSP--KSCSVDVKSALDF---ELRMNYHDLE---CNVRQ- 435
            |||...::...::|.|:|.|::||||..  :.|..|     ||   :.|..:.||:   |.::. 
 Worm    32 IECLEDEIRIWVKTRKIFAGRIYAKGRAELEDCYKD-----DFGNQKTRKPHFDLQFGACGMKSL 91

  Fly   436 ---STAGRYVN-DIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALSEEVIV 496
               ...|.|.. .:::..|.:.:|..|....:.|.::..||    |:..::...::|....|...
 Worm    92 RSVDPRGMYYGITVVVSFHPLFITKVDQAYHVKCFFEEANK----GLTAELGVSMIPTTELEARH 152

  Fly   497 ESPNVIMRI---------TSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNS 552
            ..|.....|         ..|...::::.|.||:.:..::...|:.  |.:.|......||. ..
 Worm   153 GIPGCTYSIHRSTIDELDAGRPAGNVIQFARVGERVLHQWHCNDQM--YGVLINNCYVTDGF-GK 214

  Fly   553 EITLIDSNGCPTDH-FIMGPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCM--------- 607
            :..:||..|||.|. .|.|..|...:  :...:....|||.....|.|...|..||         
 Worm   215 KADVIDDKGCPIDPILITGIRYSSDL--QRAYAESSVFKFADKPGVWFFCQVQMCMKKHGMCDGI 277

  Fly   608 --PSCEPVQCEQEDTSGEFRSLLSY-GRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQI 669
              |||           |....::|. |.........:..|..||  .|:.|.:.||         
 Worm   278 TPPSC-----------GSMSRVISVGGEDNGGFEEEEKAPSSRR--KTTPKPSGSD--------- 320

  Fly   670 TDKFGFKQDKQE-------------SGDFYDGNETTFTANEEGHGF 702
               :.::.:|.:             |.|:...||:....:...|.:
 Worm   321 ---YDYENEKPQQKTTNAPRRSTTVSRDYDYDNESPKLHSPNSHSY 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 60/267 (22%)
cutl-8NP_001250721.1 ZP 33..285 CDD:214579 61/276 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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