DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and tyn

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster


Alignment Length:729 Identity:194/729 - (26%)
Similarity:303/729 - (41%) Gaps:176/729 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EKLMDSQ-PG-------TLMLTDCLDTCRKNKTCQ-----------SVNYETGLCVLFSAHADQL 177
            |||.|.. ||       .|.|.:|...||:...||           |.:.||. |.|.:..:...
  Fly    41 EKLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAFSFVVNPLSPSQETH-CQLQNDSSAAN 104

  Fly   178 PGALTKSQFPVFTIYAQKSCL-AVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRRECFELCLGEN 241
            |.|..:....::  |..|..| :...|.|.|..:||.|..::......:..:::..|...||.|.
  Fly   105 PSAAPQRSANMY--YMIKLQLRSENVCHRPWSFERVPNKVIRGLDNALIYTSTKEACLSACLNER 167

  Fly   242 DFTCRSANYDRTSGACELSELDRLTLAGSQAFQVND--GSDYLENHCVDEPNKLCEFKRLPGRIL 304
            .|.|||..||..:..|.||:.||  .:..|..|:.|  |:||.||.|: :|.:.|:..|..|...
  Fly   168 RFVCRSVEYDYNNMKCVLSDSDR--RSSGQFVQLVDAQGTDYFENLCL-KPAQACKNNRSFGNSQ 229

  Fly   305 K---TVDSVYQ------------EVSSIDECRELC-LNSPYRCHSY---------DYNDTGDMVC 344
            |   :.:.|.|            :|:|...||..| :.|.:.|.|:         .||      |
  Fly   230 KMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCRSFLYLGQPQGSQYN------C 288

  Fly   345 RLSHHSRATLADVQEPFLE---------------------------------------------- 363
            ||.|....||.|....:|.                                              
  Fly   289 RLYHLDHKTLPDGPSTYLNHERPLIDHGEPIGQYFENQCEKAAGLGAGSPPGTLDKIDTLPVSLD 353

  Fly   364 -VPEASTYELT----------SCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSA 417
             :.:.:...||          :||:|::.|....:..::||:|.|||::||.|..::|::||.::
  Fly   354 TIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSETCNIDVINS 418

  Fly   418 LDFELRMNYHDLECNVRQSTAGRYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDV 482
            ..|.|.:.....:||. ||..|.|.|.:::|||.:::|.:|....:.|.||:::|:::.|     
  Fly   419 DAFRLDLTMAGQDCNT-QSVTGVYSNTVVLQHHSVVMTKADKIYKVKCTYDMSSKNITFG----- 477

  Fly   483 RGDIMPALSEEVI-----VESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRE 542
               :||....|:|     .|:|...:||......: :.:..:||.|..:.|| .|.:||.||.|.
  Fly   478 ---MMPIRDPEMIHINSSPEAPPPRIRILDTRQRE-VETVRIGDRLNFRIEI-PEDTPYGIFARS 537

  Fly   543 LVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKG-SVSGKMLLSNFDAFKFPSSEVVQFRALVTPC 606
            .|||.....:...:||.:|||||    ..|:.| :..|..|.|.::||:|..|..|.|:..|..|
  Fly   538 CVAMAKDARTSFKIIDDDGCPTD----PTIFPGFTADGNALQSTYEAFRFTESYGVIFQCNVKYC 598

  Fly   607 MPSCEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQITD 671
            :..|||..||....|.|     |.||:|            ||.|:::...:..||.:.|.|.:.|
  Fly   599 LGPCEPAVCEWNMDSFE-----SLGRRR------------RRSIESNDTKSEDDMNISQEILVLD 646

  Fly   672 KFG------FKQDKQESGDFYDGNETTFTANEEGHGFC---VNAIGLITAATIFLLTQLAVIAIW 727
             ||      ||.|  .|.||  ..:.|.|..|.    |   .:.:.|.....:.:|..::.:   
  Fly   647 -FGDEKREFFKAD--PSTDF--AKDKTVTIIEP----CPTKTSVLALAVTCALMILLYISTL--- 699

  Fly   728 TYCYQRRQKLQPYQ 741
             :||..::.:||::
  Fly   700 -FCYYMKKWMQPHK 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 22/83 (27%)
PAN_AP_HGF 211..285 CDD:238532 25/75 (33%)
PAN_1 294..373 CDD:278453 24/150 (16%)
ZP 381..615 CDD:214579 77/239 (32%)
tynNP_001027032.1 PAN_4 46..97 CDD:405052 13/51 (25%)
PAN_AP_HGF 131..210 CDD:238532 26/80 (33%)
PAN_1 236..327 CDD:394981 20/96 (21%)
ZP 382..598 CDD:214579 73/230 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440846
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
54.840

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