DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and Matn3

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001382499.1 Gene:Matn3 / 313954 RGDID:1305085 Length:481 Species:Rattus norvegicus


Alignment Length:432 Identity:88/432 - (20%)
Similarity:144/432 - (33%) Gaps:154/432 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LALMLYSAATAKEHLRIR--------RQAAESVTAAAPNASKVMASEEIKDK--TEWPGAKETST 66
            :|::.| |:|.|...::.        :||...:|..:......:|.:...::  |...||:..::
  Rat   117 VAVVNY-ASTVKIEFQLNTYSNKQALKQAVARITPLSTGTMSGLAIQTAMEEAFTVEAGARGPTS 180

  Fly    67 EINRTE------RPVENV-----ETRNSGFDLPAA----SDLSS--SLGSE--EDSIYYDNAPVD 112
            .|.:..      ||.:.|     ..|.||.:|.|.    :|:.|  .:.|:  ||.::|..    
  Rat   181 NIPKVAIIVTDGRPQDQVNEVAARARASGIELYAVGVDRADMESLKMMASKPLEDHVFYVE---- 241

  Fly   113 CNPELVGFEIVTGYVFSAPEKLMDSQPGTLMLTDC-LDTCR-KNKTCQSVNYETGLCVLFS---A 172
                          .:...|||    ......|.| ||.|. ....||.|      ||...   .
  Rat   242 --------------TYGVIEKL----SARFQETFCALDQCMLGTHQCQHV------CVSDGDGRH 282

  Fly   173 HADQLPGALTKSQFPVFTIYAQ-KSCLAVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRR----- 231
            |.:...|         :|:.|. |:|.|:..|:            |.|.....:.|..|.     
  Rat   283 HCECSQG---------YTLNADGKTCSAIDKCA------------LNTHGCEQICVNDRNGSYHC 326

  Fly   232 ECFELCLGENDFTCRSANYDRTSGACELSELDRLTLA--GSQAFQVNDGS-----DYLENHCVDE 289
            ||:|      .:|   .|.||.:.|.:    |:..|.  |.|...||||:     :..|.:.::.
  Rat   327 ECYE------GYT---LNADRKTCAAQ----DKCALGTHGCQHICVNDGAGSHHCECFEGYTLNA 378

  Fly   290 PNKLCEFKRLPGRILKTVDSVYQEVS-SIDECRELCLNS---PYRCH---SYDYNDTGDMVCRLS 347
            ..|.|              ||..:.: ....|:.:|::.   .|.|.   .|..||         
  Rat   379 DKKTC--------------SVRDKCALGTHGCQHICVSDGAVSYHCDCFPGYTLND--------- 420

  Fly   348 HHSRATLADVQEPFLEVPEASTYELTSCYNVTIECGGGDMLA 389
              .:.|.:|::            |:.|..::...|..|..||
  Rat   421 --DKKTCSDIE------------EVRSLISIEDACSCGATLA 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 18/82 (22%)
PAN_AP_HGF 211..285 CDD:238532 21/85 (25%)
PAN_1 294..373 CDD:278453 13/85 (15%)
ZP 381..615 CDD:214579 4/9 (44%)
Matn3NP_001382499.1 vWFA 75..298 CDD:412136 44/218 (20%)
FXa_inhibition 305..341 CDD:405372 12/56 (21%)
FXa_inhibition 347..383 CDD:405372 9/35 (26%)
FXa_inhibition 389..425 CDD:405372 7/46 (15%)
Matrilin_ccoil 438..478 CDD:402147 4/11 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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