DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-12

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001309578.1 Gene:cutl-12 / 188735 WormBaseID:WBGene00011928 Length:569 Species:Caenorhabditis elegans


Alignment Length:393 Identity:87/393 - (22%)
Similarity:141/393 - (35%) Gaps:83/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IECGGGDMLARIRTSKLFNGKVYAKG-SPKS-CSVDVKSAL-------DFELRMNYHDLECNVRQ 435
            :|||...:...|..:..|.|.||.:| .|:: |.::..:.|       |...|.     .||||:
 Worm    36 LECGSEGIRLHINPTGTFGGHVYVRGFFPQTVCHLNYCTRLTNRPIVMDLPFRG-----PCNVRR 95

  Fly   436 -----STAGRYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDL-DVRGDIM-----PA 489
                 ..:..|...:|||||.:.|||.|....|.|.|.....::...::: |:....:     |.
 Worm    96 RRNVAPPSISYDVTVIIQHHPLFVTSFDKAYRLNCIYRQQESTLQQRINVSDIPSTALQSKNAPK 160

  Fly   490 LSEEVIVESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNSEI 554
            ...:|:..|.|          ..::|.|.|||.:..|:..  :...:...:...|..| ....:.
 Worm   161 CRYDVLSGSLN----------GPVVRFANVGDVVVHKWTC--DSDRFGFVVHSCVVRD-ESGKDF 212

  Fly   555 TLIDSNGCPTDHFIMGPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCM-----------P 608
            ..||..||.|| |.:.|....|...|...:...||::....:|.|...:|.|.           |
 Worm   213 QFIDERGCVTD-FSLFPEVSYSDDLKSAFTAVRAFRYADQVMVHFSCQITTCQKQENGCEGISPP 276

  Fly   609 SCEPVQC--------------EQEDTSGEFRSL------LSYGRKRRSLNTTDDHPRPRRDIDTS 653
            .|.|:..              |:.|..|...:|      .|.| ...::.:|....|.:....|:
 Worm   277 ICRPMDLGPIKVHYVKHEKNGEKFDEGGGVETLPPRTENTSEG-STTTVRSTTTRERAQAFSTTT 340

  Fly   654 KKSAPSDMLLVQSIQ---------ITDKF--GFKQDKQESGD-FYDGNETTFTANEEGHGFCVNA 706
            .|:..|..|.::::|         .:.||  |:.....|||: ....|...|....:.....||.
 Worm   341 HKTTTSSSLQLKTVQRDEDNNSFSPSSKFRNGYNFPNVESGEGVGQDNTAEFGVKRKSSDAGVNE 405

  Fly   707 IGL 709
            .|:
 Worm   406 YGI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 63/264 (24%)
cutl-12NP_001309578.1 ZP 37..281 CDD:214579 62/262 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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