DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and R07A4.4

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_509797.4 Gene:R07A4.4 / 187644 WormBaseID:WBGene00011075 Length:573 Species:Caenorhabditis elegans


Alignment Length:453 Identity:96/453 - (21%)
Similarity:154/453 - (33%) Gaps:113/453 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LFLALMLYSAATAK---EHLRIRRQAAESVTAAAPNASKVMASEEIKDKTEW------------- 58
            :||..:|..|...|   .|..||....:|:........:...|..::..|:.             
 Worm     6 IFLLFVLVQAQKNKCFVSHKNIRISCGKSIDTRTSITLEECESACVRYNTQCQTIQYDYYRNICE 70

  Fly    59 ----PGA----KETSTEINRTERPVENVE--------TRNSGFDLP---AASDLSSS-LGSE--- 100
                |..    |.||.|:.:.|..:.|.|        |.::...:|   ..|:||.| |.|.   
 Worm    71 IFNVPSPLQMNKTTSEEMQKREIALGNTECAIASLLPTIDTTHLIPNWDCLSELSHSVLNSSQLT 135

  Fly   101 EDSIYYDNAPVDCNPELVG---------------------FEIVTGYVFSAPEKLMDSQPGTLML 144
            :.|...|..||. :|...|                     ||||:..:..|.|...:.:  ..::
 Worm   136 QSSQQLDLKPVK-SPTFTGELATPQRPKPDIKIKKIANEQFEIVSNTIGGAEESRKEQK--VALM 197

  Fly   145 TDCLDTCRKNKTCQSVNYETGLCVLFSAHADQLPGALTKSQFPVFTIYAQKSCLAVKPCSRAWYV 209
            .:.:|...:.:...:                      |...|.|..:.....|    |......|
 Worm   198 AEPIDNINQQQQFDN----------------------TLRNFAVEVLPIVPDC----PLGEHSRV 236

  Fly   210 DRVQNYKLKTEVKRTVSVASRRECFELCL-------GENDFTCRSANYDRTSGACELSELDRLTL 267
            ..::..::..|...|..||...:|.:.|.       ......||||:::|.:..|.:.. |.:..
 Worm   237 QIIEGVEVSREATITFQVAILEQCVQACRVSTYADGSRLPLLCRSAHFNRATRQCSVYS-DAINP 300

  Fly   268 AGSQAFQVNDGSDYLENHCVDEPNKL----CE--FKRLPGRILKTVDSVYQEVSSIDECRELCLN 326
            .|...::.|....|:|..|:  |:.:    |:  |:|:|..||....|....|:|.:||...|:.
 Worm   301 NGYLEYKPNQNVIYIEKICI--PDTVLPMSCDDVFRRIPQHILLGHASEVISVASENECVLECIK 363

  Fly   327 S----PYRCHS-YDYNDTGDMVCRLSHHSRATLADVQEPFLEVPEASTYELTSCYNVTIECGG 384
            :    ...||| ..|.|...:.|.|:.|:|.|......|.|.. :....||.||  ||....|
 Worm   364 AKTLRSVACHSILHYPDFSSLNCILNVHTRHTKNQYFTPELAY-KVDYVELGSC--VTSAASG 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 10/76 (13%)
PAN_AP_HGF 211..285 CDD:238532 17/80 (21%)
PAN_1 294..373 CDD:278453 25/85 (29%)
ZP 381..615 CDD:214579 1/4 (25%)
R07A4.4NP_509797.4 PAN_AP 20..>73 CDD:214680 6/52 (12%)
PAN_1 237..319 CDD:278453 17/82 (21%)
PAN_1 333..416 CDD:278453 25/83 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157392
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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