DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and F52C9.5

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001367876.1 Gene:F52C9.5 / 186097 WormBaseID:WBGene00018675 Length:645 Species:Caenorhabditis elegans


Alignment Length:639 Identity:117/639 - (18%)
Similarity:207/639 - (32%) Gaps:207/639 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LFLALMLYSAATAKEHLRIRRQAAESVTAAAPNASKVMASEEIKDKTEWP-----GAKETSTE-- 67
            :||:|...|:::         ...|.:|      .|..:||:......:|     |....|.:  
 Worm    13 IFLSLTYISSSS---------NLVEDIT------DKQDSSEDDDHLQTFPTPPPIGTTTASADSL 62

  Fly    68 INRTERPVENVETRNS-GFDLPAASDLSSSLG------------SEEDSIYYDNAPVDCNPELVG 119
            .||..:.:...|.:.| .|.:....||.::..            :..||......|...|..:.|
 Worm    63 FNRMNKILRKEEKQKSQNFQIFNEKDLVTNSNANPYFSTTRKPKNRSDSSQKARDPDPQNQVIAG 127

  Fly   120 FEIVTGYVFSAPEK--LMDSQP----GTLMLTDCLDTCRKNK----TCQSVNYE--TGLCVLFSA 172
            ...::...|...|.  ::::||    .:..|..|...|..::    :|:|..|:  ..:|.||:.
 Worm   128 IPDLSDPCFRRYENSIIVNAQPYERRSSTGLIHCKSHCLNSQIGVYSCRSFVYDNVNRVCDLFAH 192

  Fly   173 HADQLPGALTKSQF-----PVFTIYAQKSCLAV--------KPCSR-----------------AW 207
            ..||.|..|.|.|.     |...::    ||::        .|.|.                 |.
 Worm   193 VGDQAPARLLKFQTRDYFEPTDIVH----CLSMINGESSSSAPSSEDEDSPPSPPPSAPIVALAT 253

  Fly   208 YVDRVQNYKLKTEVKRTVSVAS---------------RRECFEL-------------------CL 238
            ..|:...::..||....::|||               |.|.|||                   |:
 Worm   254 NTDKRDEHEEMTETIEDITVASPSSDSCPRGKQSTFLRTEGFELFSHDDQELVVGDVAECAKACI 318

  Fly   239 GENDFT-----CRSANYDRTSGACELSELDRLTLAGSQAFQVNDGSDYLENHCVDE------PNK 292
             ||...     |:|.::..::..|..:....:.:...|..|..|.| |.|..||.:      |:.
 Worm   319 -ENKINGVALKCKSFDFLSSTSTCAFTSEAAVPVGNGQLKQREDAS-YHEKICVSKSFVESCPST 381

  Fly   293 LCEFKRLPGRILKTVDSVYQEVSSIDECRELCLNSPYRCHSYD------YNDTGDMVCRLSHHSR 351
            .  |.|.|..||........:..|.:.|.:.|||| |:...::      |.:...:.|.|:..:|
 Worm   382 F--FSRHPQMILVGFAESVSDSPSFEHCFDTCLNS-YQLFGFNCTSGMYYFEENQLNCILNSENR 443

  Fly   352 AT-----------LADVQEPFLEVPEA--STYELTSCYNVTIECGGGDML--------------- 388
            .|           :.|..|.....|.:  |..::....|...:..|.|.:               
 Worm   444 NTQRELFTEENTDIVDYFEVECTTPRSKQSKRKMAGVRNFETDAIGADKMVTDHEDVEEDGSKWE 508

  Fly   389 --ARIRTSKLFNGKVYAK-GSPKSCSVDVKSALDFELRMNYHDLECNVRQSTAGRYVNDIIIQH- 449
              :..:..|....|:.|. ...:.|:.:|:..:|   .::..|:..::::  ||...|:   .| 
 Worm   509 SWSECQDGKQTRRKICANFNQIEDCAEEVRDCVD---EIDSTDMRMSIKR--AGELENN---DHE 565

  Fly   450 ----------HDMIVTSSDLG--------------------LALACQYDLTNKS 473
                      .|.:.|..::.                    :.|:|.|.|.:.|
 Worm   566 QIEDNNTDASEDPVPTKEEIAEVKQKIRRTGFKCPLNECCRVFLSCSYGLRHNS 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 20/93 (22%)
PAN_AP_HGF 211..285 CDD:238532 22/112 (20%)
PAN_1 294..373 CDD:278453 21/97 (22%)
ZP 381..615 CDD:214579 20/142 (14%)
F52C9.5NP_001367876.1 PAN_AP 132..213 CDD:214680 19/80 (24%)
PAN_1 287..369 CDD:394981 17/83 (20%)
PAN_AP_HGF 383..462 CDD:238532 18/79 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157389
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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