DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neo and cutl-17

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001379101.1 Gene:cutl-17 / 185474 WormBaseID:WBGene00009541 Length:912 Species:Caenorhabditis elegans


Alignment Length:853 Identity:171/853 - (20%)
Similarity:307/853 - (35%) Gaps:265/853 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SVTAAAPNASKVMASEEIKDKTEWPGAKETSTEINRTERPVENVETRNSGFDLPAASDLSSSLGS 99
            |...:||||:..:.||..:       ..|.||::      :::| |.|.     .|:..|:||.:
 Worm    17 SSRCSAPNATTYLRSEGTR-------LMEFSTKV------MKDV-TLNE-----CANACSNSLST 62

  Fly   100 EED-SIYYDNAPVDCN-----------------PELVGFE----IVTGYVFSAPEKLMDSQPGTL 142
            ||. |..||.:.:.|:                 .:.:.|.    ::...|..||.. .:..|.::
 Worm    63 EECLSFEYDASILQCSHHSDDGQPFGASVLAKASQTISFFQQICLLEEAVCKAPYS-FERYPQSI 126

  Fly   143 M------------LTDCLDTCRKNK-----TCQSV--NYETGLCVLFSAHADQLPGALTKSQFPV 188
            :            |:|||..|..::     .|:|.  .||||.|::...:....|.....:....
 Worm   127 LIGHAMKVLTVDGLSDCLSKCALSQRSYDFLCKSAIYYYETGECIMNRDNKFIYPKLFKTNILDT 191

  Fly   189 FTIYAQKSC--LAVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRRECFELC----LGENDFTCRS 247
            ...|.:.:|  ::.||.....:| |.:.|.:.......|..:..:||.:||    :||.:|.|::
 Worm   192 LVDYFENNCADVSCKPEETLHWV-RTEEYLIDESKDVIVESSDAQECNQLCQNNKIGEENFPCKA 255

  Fly   248 ANYDRTSGACEL-SELDRLTLAGSQAFQ---VNDGSDYLENHCVDEPNKL----CEFKRLPGRIL 304
            ..|..:...|.| :|...:...|.:.|.   :|.| :|.|.:|:  |..|    ..|:.:..|::
 Worm   256 FAYSNSKQECHLTAESSYVGHKGDKRFNLAPLNSG-EYFEKYCL--PTNLQCIEASFELVANRMM 317

  Fly   305 KTVDSVYQEVSSID--ECRELCLNSPYRCHS--YDYNDTGDMVCRLSHHSR------ATLADV-- 357
               .|.|:.:|::.  ||...|:|...||.|  |.|.|....:..:|..||      |...|.  
 Worm   318 ---TSAYKTISALSQHECLSQCMNDGARCSSATYFYMDDECQLSDISQFSRPNEFVVANFTDYFD 379

  Fly   358 -------QEPFLEVPE------------------------ASTYE-------------------- 371
                   .:|.|..||                        |:.:|                    
 Worm   380 KICDPADPKPMLTTPETPPELIQNSVDEEETTSERSIAQGAANFEVATTGTSVEFEDDNLLKDNQ 444

  Fly   372 -------LTSCYNV------------------------------------------------TIE 381
                   :|:..|:                                                :.|
 Worm   445 AVDAVHGVTTTTNIGEKRETKVEIEETVIDDADEFSREIDDSHEESPLTSSEESEGRVKARLSTE 509

  Fly   382 CGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSALDFELRMNY---HDLECNVRQSTAGRYVN 443
            |....:...::.:...:|.:|.|....||.....:....||.:.:   .|.:|...:|...::..
 Worm   510 CRMSGISVSLKFATPTSGTIYIKDHFSSCRQSFSNTSFAELHIPFPTEDDSKCGGIESEPHKWDY 574

  Fly   444 DIIIQHHDM----IVTSSDLGLALACQYD-LTNKSVSNGVDLDVRGDIMPALSEEVIVESPNVIM 503
            :::::.:||    :||:.|....::|.:. :.:|:....:...|.||          |:|..|:|
 Worm   575 NVVVERNDMKTPSLVTTKDKTFQVSCDFSKIADKNQLAALKPKVEGD----------VKSEKVLM 629

  Fly   504 RITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNS----EITLIDSNGCPT 564
            .|. |:| ..:.:..:|..::|::.::||......||.|.:| :.|...    |...|...|||.
 Worm   630 EIV-RNG-QAVTTVPLGAEVSLRWTVIDETDKLGFFINECIA-ERVGGQPPYPEPLKIIYQGCPE 691

  Fly   565 D----HFIMGPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCMPSCEPVQCEQEDTSGEFR 625
            :    ..:..|:.|   :|::..:....|:|..|..|:.:..:..|:..|.||.|:..    |.|
 Worm   692 EKVRNRLLHDPVVK---NGEVYSTKMKVFRFDGSRRVRIKCSIDVCVEKCPPVICDDL----EIR 749

  Fly   626 SLLSYGRKRRSLNT------------------------TDDHP-----RPRRDIDTSKKSAPSDM 661
            ::.|:|||:|:.|.                        ||:..     :||.:..||..|:....
 Worm   750 NVDSFGRKKRNSNVEKWLKAGNKKETRKRRMVTGTLTITDEEETNTTVKPRPEFSTSSSSSSQQQ 814

  Fly   662 LLVQSIQI 669
            ..||..:|
 Worm   815 YCVQKDRI 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 19/99 (19%)
PAN_AP_HGF 211..285 CDD:238532 21/81 (26%)
PAN_1 294..373 CDD:278453 26/148 (18%)
ZP 381..615 CDD:214579 54/249 (22%)
cutl-17NP_001379101.1 PAN_1 26..106 CDD:394981 19/98 (19%)
PAN_AP_HGF 114..199 CDD:238532 17/85 (20%)
PAN_AP 208..295 CDD:214680 21/88 (24%)
PAN_AP_HGF 308..380 CDD:238532 20/74 (27%)
Zona_pellucida 509..744 CDD:421542 54/250 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 78 1.000 Domainoid score I5679
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005301
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.970

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