DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-5

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_495472.1 Gene:cutl-5 / 184302 WormBaseID:WBGene00017351 Length:437 Species:Caenorhabditis elegans


Alignment Length:439 Identity:97/439 - (22%)
Similarity:147/439 - (33%) Gaps:153/439 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 CGGGDMLARIRTSKLFNGKVYAKGSPKSCSVDVKSALDFELRMNYHDLECNVRQSTAGRYVND-- 444
            |....::.:|:||......:|..|                 |.|  |:||..|........:|  
 Worm    33 CEEDKIIIKIKTSMSNPSNIYVDG-----------------REN--DMECVSRNQNKIEVAHDKC 78

  Fly   445 ------------------IIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALS 491
                              |.:|.|.:.||.||......|.|          .|..|..||...|.
 Worm    79 GVVNEKTEQPNGSIRRLCIFVQLHPLFVTESDRSYCAQCVY----------ADSHVMKDIESTLD 133

  Fly   492 EEVIVESP----------------NVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYE-IF 539
               |.|:|                |..:|...:||.. ::.|.:||.:   |.:......:. |.
 Worm   134 ---ISEAPPLQLSPQFDAPVMPKCNYSIRKQGKDGPP-VQYASIGDSV---FHVWSCDGNHNGIL 191

  Fly   540 IRELVAMDGVDNSEITLIDSNGCPTDHFIMG-PIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALV 603
            ::.....||..| :|.:||.|||..||::|. |||.|..|  :.......|||....|.:|...:
 Worm   192 VQNCHVEDGQGN-KILIIDQNGCGIDHYVMDTPIYNGEQS--IAFQETHVFKFAQRTVTRFICQI 253

  Fly   604 TPCM--------------PSCE-------------------PVQCEQE------DTSGEF----- 624
            ..||              ||.|                   |.....:      |||.||     
 Worm   254 KICMKGDDCKRLSPPEACPSLEERFNEDPDKGKVFADEIHPPASMPSDLTGPNGDTSVEFVRRAP 318

  Fly   625 -RSLLSYG------RKRRS--LNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQITDKFGFKQDKQ 680
             :..:.||      |.||.  :||.     ||.......|:...:|.:|..:::   |...||. 
 Worm   319 AKGSIYYGVGYNPKRHRREILINTA-----PRSPKQFVMKNGYPEMEMVGELRV---FENPQDV- 374

  Fly   681 ESGDFYDGNETTFTANEEGHGFCVNAIGLITAATIF---LLTQLAVIAI 726
               ::|:...::.:|..   ..|.:     .::|:|   |:|.|.|::|
 Worm   375 ---EYYESQRSSASATS---SVCES-----QSSTLFFCLLVTALVVLSI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 67/303 (22%)
cutl-5NP_495472.1 ZP 32..274 CDD:214579 64/279 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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