DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and C34C12.7

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_497718.2 Gene:C34C12.7 / 183201 WormBaseID:WBGene00007926 Length:284 Species:Caenorhabditis elegans


Alignment Length:234 Identity:48/234 - (20%)
Similarity:85/234 - (36%) Gaps:65/234 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 QNYKLKTEVKRTVSVASRRECFELCLGEN--DFTCRSANYDRTSGACELSELDRLTLAGSQAFQV 275
            :||.:......|.||..:.||..:||..:  ...|.||.:......|.:|:.:::|  ....|..
 Worm    43 KNYWIVGHAFHTSSVQFKDECLRMCLTSSIRKAKCLSAMHVPNDDECVISDQNQVT--KPDLFIE 105

  Fly   276 ND--GS---DYLENHCVDEPNK------------------LCEFKRLPGRILKTV--------DS 309
            ||  |:   ::..|.|||.|:.                  :.||.:..|:..:.:        :|
 Worm   106 NDTPGTFTVNFFRNICVDPPDAEGVDRFEARLQGYKGGEGIIEFAQAVGKNTQVMVVISGLKENS 170

  Fly   310 VYQEVSSIDECRELCLNSPYRCHSYD-YNDTGD--MVCRLSHHSRATLADVQEPF---------- 361
            :| |::.:.:.:|    ...:||... .|..|.  |:....|...|.     ||:          
 Worm   171 LY-EINFLPDTKE----KGGQCHRKSRVNGEGKTLMIVETDHTGMAV-----EPWKVIDFDGFEE 225

  Fly   362 ------LEVPEASTYELTSCYNVTIECGGGDMLARIRTS 394
                  :.|.|.||..:..|.::.:.....:. :..|||
 Worm   226 NVISKTIVVVEKSTQTIVDCGSIRLATASSNS-STTRTS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532 19/78 (24%)
PAN_1 294..373 CDD:459635 20/105 (19%)
ZP 381..615 CDD:214579 3/14 (21%)
C34C12.7NP_497718.2 PAN_AP_HGF 36..107 CDD:238532 16/65 (25%)
Blue background indicates that the domain is not in the aligned region.

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