DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-27

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_502252.3 Gene:cutl-27 / 183003 WormBaseID:WBGene00007802 Length:969 Species:Caenorhabditis elegans


Alignment Length:788 Identity:165/788 - (20%)
Similarity:268/788 - (34%) Gaps:238/788 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 RPVENVETRNSGFDLPAASDL---SSSLG---------SEEDSIYYDNAPVD----CNPELVGFE 121
            |.|:...|.|..|.....||:   |:||.         |:|::.   |.|..    ...:||...
 Worm   269 RSVQFDSTSNECFVSDETSDVAVPSTSLDILEPFCVPRSDENTC---NRPYSFEKMITSKLVNSS 330

  Fly   122 IVTGYVFSAPEKLMDSQPGTLMLTDCLDTCRKNKTCQSVNYE--TGLCVLFSAHADQLPGALTKS 184
            |:......:.||             ||..|...:.|:||||.  |..|:| |:.:..:...::..
 Worm   331 IIKEITNQSTEK-------------CLQKCIDMENCKSVNYNVLTRSCLL-SSTSKSISATVSDE 381

  Fly   185 QFPVFTIYAQKSC--LAVKPCSRA--------WYVDRVQNYK-------LKTEVKRTVSVASRRE 232
            .:..:    ::||  :...|.|.:        .|.:.|..||       |.:|.....:|.:.::
 Worm   382 NYDFY----ERSCPYIPTSPTSSSSFIPHPPTLYPEVVTRYKLMERGRQLSSEFVNKTNVENVQD 442

  Fly   233 CFELCLGENDFTCRSANYDRTSGACELSELDRLTLAG--------SQAFQVNDGSDYLENHCVDE 289
            |:.||: .:...|...::..||..|.||.|.....|.        |:.|.....|..:....|..
 Worm   443 CWSLCV-NSKVHCELISFSTTSNQCLLSTLKSSETASDSKKITKPSETFDTYSSSVSVSTTHVPT 506

  Fly   290 PNKLCEFKRLPGRILKTVDSVYQEV--------SSIDECRELCLNSPYRCHSYDYNDTGDMVCRL 346
            ..:.....| |.....||.|....|        ||..|..|            |.||        
 Worm   507 SIRSTSSAR-PTTYSTTVKSSTTTVSTSTRHDGSSSSESLE------------DMND-------- 550

  Fly   347 SHHSRATLADVQEPFLE--------------VPEAST------YELTSCYNVTIECGG------- 384
                   :.|:.|.|::              :|.|.|      .|.||...:..|..|       
 Worm   551 -------IFDINENFMDTTMTSSSTRSRAHALPNAETKSSNKSSESTSLLPIDPELVGLEDSTPI 608

  Fly   385 ----GDMLARIRTSKL----------------------FNGKVYAKGSPKSCSVDVKSALDFEL- 422
                ...:|.:..|:|                      :.|.|||......|.|.||::..|.: 
 Worm   609 QLPLNSGIAHVDLSRLSIAAQCLPQGINITFDLTQNTKYTGVVYASERFDQCRVFVKNSSAFSIF 673

  Fly   423 --RMNYHD----LECNVRQSTAGRYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKS-VSNGVDL 480
              |..::.    :|.|...||.....||.|:.|.  :.|..||...::|||:..:.: ||.|:  
 Worm   674 IPRPKHNSWCNAVELNNEMSTIIIMSNDRILPHD--VTTKDDLFYQVSCQYNPNDDAKVSKGI-- 734

  Fly   481 DVRGDIMPALSEEVIVESPNVIMRIT---SRDGSDMMRSAEVGDPL---------ALKFEIVDEQ 533
             |.|...|.:    |.:..::..:|:   ::|| .|:.|..||:.|         |....|||  
 Worm   735 -VVGGPSPVM----ITKKSHIHEKISLEITKDG-QMVESVFVGESLLATVKSNVSAELLRIVD-- 791

  Fly   534 SPYEIFIRELVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKGSVSGKMLLSNFDAFKFPSSEVVQ 598
                 .....|...|...| :.|| ::||.....||.|: :.:.||..  |:..||:...||.:.
 Worm   792 -----CTAHRVGGTGPPAS-VNLI-ADGCALLPAIMSPM-RLTPSGWQ--SSLSAFRIDGSEQID 846

  Fly   599 FRALVTPCMPSCEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLL 663
            ...:::.|          .|:......:..|...:.|.:.:|.:.                    
 Worm   847 VVCIISIC----------DENKKCPLMACTSPANREREVRSTSEE-------------------- 881

  Fly   664 VQSIQITDKFGFKQDKQESGDFYDGNETTFTANEEGHGFCVNAIGLITAATIFLLTQLAVIAIWT 728
             .||::..:...|.||.     |.|::..|..      .|:.....|.|...|||:..:::....
 Worm   882 -NSIRVDRRLLVKGDKN-----YAGSQKFFAP------ICIEPFFYIPAVAFFLLSLASILVSIF 934

  Fly   729 YCYQRRQK 736
            ..::||::
 Worm   935 LSFRRRRR 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 15/78 (19%)
PAN_AP_HGF 211..285 CDD:238532 20/88 (23%)
PAN_1 294..373 CDD:278453 20/106 (19%)
ZP 381..615 CDD:214579 66/286 (23%)
cutl-27NP_502252.3 PAN_1 148..219 CDD:278453
PAN_AP_HGF 235..>287 CDD:238532 5/17 (29%)
PAN_AP_HGF 313..389 CDD:238532 19/93 (20%)
PAN_1 423..493 CDD:278453 16/70 (23%)
ZP 629..867 CDD:214579 62/269 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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