DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-26

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_741299.2 Gene:cutl-26 / 176896 WormBaseID:WBGene00021950 Length:502 Species:Caenorhabditis elegans


Alignment Length:244 Identity:58/244 - (23%)
Similarity:109/244 - (44%) Gaps:30/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 IRTSKLFNGKVYAKGS-PKSCSVDVKSALDFELRMNYHDLECNVRQSTAGR-YVNDIIIQHHDMI 453
            |||||.|.|.|..:.| .::|.|.........|::|....||.::...|.: |...:.:..|.::
 Worm    42 IRTSKPFEGLVQTRSSESEACRVQGFGTNVAVLKLNLKSDECGIKYDVASKTYSVTVDVHSHPVL 106

  Fly   454 VTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALSEEVIVESPNVIMRI-TSRDGSDMMRSA 517
            :...|..:.:.|      :.::||..         ..:.::..:|.:..:|: :||...|.::.:
 Worm   107 IVEGDKSVNVTC------REIANGTQ---------HYASQMTSQSSDYQLRVLSSRLPVDTVKYS 156

  Fly   518 EVGDPLALKFEIV--DEQSPYEIFIRELVAMDGVDNSEITLIDSNGCPTDHFIMGPI-YKGSVSG 579
            :   |..|:...:  .:|:.|..|:.:.:|.....|..:.|.|..||.....|||.. .:.||..
 Worm   157 Q---PYTLQIRPLPSTQQNSYSFFVGQCIAQPVGGNVTVQLTDPVGCALFKSIMGHFARRESVEE 218

  Fly   580 KMLLSNFDAFKFPSSEVVQFRALVTPCMPSCEPVQCEQEDTSGEFRSLL 628
            ..:.|   .|:||:::.::...:||.|..|||...|:|:.::.   |||
 Worm   219 AEIPS---MFRFPNAKQLKISCIVTECDGSCEARTCDQDSSAS---SLL 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 53/229 (23%)
cutl-26NP_741299.2 Zona_pellucida 33..252 CDD:391783 53/230 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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