DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-28

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_499971.2 Gene:cutl-28 / 176895 WormBaseID:WBGene00018256 Length:696 Species:Caenorhabditis elegans


Alignment Length:690 Identity:160/690 - (23%)
Similarity:282/690 - (40%) Gaps:131/690 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 KLMDSQPGTLMLTDCLDTCRKNKTCQSVNYETGLCVL-----FSAHADQLPGALTKSQFPVFT-- 190
            |.:||      |:.|...|.....|....:.....:.     |:.|        ..|:.||.|  
 Worm    43 KSVDS------LSQCTRFCSSVPNCTHFTFSNAEPIEKKNGGFNCH--------LHSKSPVLTTS 93

  Fly   191 ---IYAQKSCLAVKPCSRAWYVDRVQNYKL--KTEVKRTVSVASRRECFELCLGENDFTCRSANY 250
               ....|:||..|...|::..::.....|  .:.:.:|.|: |..||...|  :.:.:||:|.:
 Worm    94 GSRTVGTKTC
LENKCLKRSFAFEKFPGRSLVNSSFIIKTFSI-SMEECLSQC--QKESSCRAALH 155

  Fly   251 DRTSGACELSELDRLTLAGSQA-FQVNDGSDYLENHCVD--EPNKLCEFKRLPGRILKTV-DSVY 311
            :..:..|:||.:...::...:. |:.:...|..||:|||  ..:..|.|.|:.|..||:| |.:.
 Worm   156 NNDTSLCQLSRVSLNSVYNPRLYFKASYSVDLYENNC
VDYAMTSSACTFMRVNGGGLKSVSDQLI 220

  Fly   312 QEVSSIDECRELC-LNSPYR--CHSYDY-NDTGDMVCRLSHHSRATLADVQEPFLEVPEASTY-- 370
            |.|.|.|||.::| :.|...  |.||.| |.|.:  |.|...|...|.  :.| ||..:.:.:  
 Worm   221 QNVGSFDECEQMCVIRSRISDVCRSYTYDNSTNE--CNLMWASARMLG--RSP-LESMKPNLFHG 280

  Fly   371 ELTSCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPK-SCSVDVKSALDFELRMNYHDLECNVR 434
            :|..|.|.:::|...::..:..:.::|.||:..|.|.| .|..|.:...||..:.::.....:..
 Worm   281 DLDDCVNFSLKC
REDNLEVKASSMRMFIGKMMTKKSKKIMCQEDYEGNYDFSSKFDFKKCGLDPN 345

  Fly   435 QSTAGRYVNDIIIQH-HDMIVTSSDLGLALACQYDLTNKSVSN-----GVDLDVR--GDIMPALS 491
            :|....|...:.::. ...:||..|..|.:.|:   .:||:.:     .|.::||  ......:|
 Worm   346 KSKDSTYRGMVHVKEGSTSLVTIRDKVLQVNCR---LHKSMPSEEQFLSVQMNVRENNKTNQVMS 407

  Fly   492 EEVIV------ESPNVIMRITSRDGSDMMRSAEVGD----PLALKFEIVDEQSPYEIFIRELVAM 546
            :.|:|      .:|...::|...|.:: ..:..:||    .||:|      .|..:..:..|||.
 Worm   408 DVVVVTAPPAQTNPKFSLKILGLDSTE-ADTVHIGDYGWIMLAVK------NSAEDFTVTNLVAK 465

  Fly   547 DGVDNSEITLIDSNGCPTDHFIMGPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCMPSCE 611
            |......:.:||.:||.....|:..|.|.....|:.:| |..|: ..:||| :.|::..|...|.
 Worm   466 DVQTGRVLRIIDEDGCVLRRDIVKEIRKTDNYVKLKIS-FSGFR-RQTEVV-YHAMMETCTVGCM 527

  Fly   612 PVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSI-QIT----- 670
            | :|.|:....|..:.:      .||..:.|.|| .|.:..|....|.::.|...: ::|     
 Worm   528 P-KCNQDMMLPEEETNV------HSLPLSLDLPR-HRMVRRSLAGEPRELQLTSDVYKVTGHKLT 584

  Fly   671 -------DKFGFKQDK-----QESGDFYDG-------NETTFTANEEGHGFCVNAIGLITAATIF 716
                   .:|.|...|     .::|:|::|       :...:|:.:.    |     ||...|..
 Worm   585 LLNPPSPKQFDFPAPKSDFEFNDNGEFHEGDVIVVKHSPNLWTSVKH----C-----LIDDVTCM 640

  Fly   717 LLTQLAVIAIW--------TYCYQR-----RQKLQPYQHS 743
            |...|..|.::        .|||.:     |:..:|.:|:
 Worm   641 LTVVLGAIQMFLMFSCFLIMYCYYQQWRFYRELNRPQEHN 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 14/73 (19%)
PAN_AP_HGF 211..285 CDD:238532 16/76 (21%)
PAN_1 294..373 CDD:278453 29/85 (34%)
ZP 381..615 CDD:214579 57/252 (23%)
cutl-28NP_499971.2 APPLE 30..103 CDD:128519 14/73 (19%)
PAN_1 114..192 CDD:278453 17/80 (21%)
PAN_1 202..292 CDD:278453 32/94 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 106 1.000 Inparanoid score I3502
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_115610
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17004
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.850

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