DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-24

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001023450.1 Gene:cutl-24 / 176831 WormBaseID:WBGene00021396 Length:601 Species:Caenorhabditis elegans


Alignment Length:248 Identity:54/248 - (21%)
Similarity:103/248 - (41%) Gaps:47/248 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 DIMPAL--SEEVIVESPNVIMRITSRDG---SDMMRSAEVGDPLALKFE---IVDEQSPYEIFIR 541
            ||...|  ::|..:| |.|.:.|...:|   ..:....::||.::|..:   .::|...:::|:.
 Worm   380 DITSVLKTTQEQQIE-PEVTLEIQRGEGPFAPPVTTPIKIGDNISLVVKAKSYLNETDQFDMFVH 443

  Fly   542 ELVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKGSVSGKMLLSN--FDAFKFPSSEVVQFRALVT 604
            ...|.||..::::.:||.|||........|:::...|...:...  ..|||||..:.|.|     
 Worm   444 SCFATDGKGDTKVQMIDENGCVIRLEFASPLHRAKDSENTMFYYLLIKAFKFPGPDDVYF----- 503

  Fly   605 PCMPSCEPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQSIQI 669
                ||                .:.:..|.::.|.. ...|.||:|   .:...::|.|..|:.:
 Worm   504 ----SC----------------TIEFTPKTKAPNIC-SKLRRRREI---LEEGMTEMRLFDSVNV 544

  Fly   670 TDKFGFKQDKQESGDFYDGNETT-FTANEEGHGFCVNAIGLITAATIFLLTQL 721
                  :.:.::|....:...|: .|.:||.|.:.|....|:.:.||.|::.|
 Worm   545 ------ELENRDSNVKTEQLSTSPETCSEEKHLYIVVITVLLVSVTISLVSNL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 33/139 (24%)
cutl-24NP_001023450.1 Zona_pellucida 34..>92 CDD:391783
PHA03247 <169..415 CDD:223021 9/35 (26%)
Zona_pellucida <388..516 CDD:391783 31/153 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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