DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neo and cutl-16

DIOPT Version :10

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_495296.2 Gene:cutl-16 / 174065 WormBaseID:WBGene00019426 Length:488 Species:Caenorhabditis elegans


Alignment Length:303 Identity:81/303 - (26%)
Similarity:116/303 - (38%) Gaps:56/303 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IECGGGDMLARIRTSKLFNGKVYAKG--SPKSCSVDVKSALDFELRMNYHDLECNV-RQSTAG-- 439
            :.|..|.|..::.|.|.....|:.||  ....||....:...||..      :|:| ||..|.  
 Worm    33 VSCHSGFMSLKVNTEKSPPSHVFVKGHFRKDGCSFSNTANATFEFS------KCDVMRQREANPK 91

  Fly   440 --RYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALSEEVIVESPNVI 502
              .|...:::|.|.:..|..|....|.|.|....|:|  |.::.| .|..|...|:   |||..:
 Worm    92 GMAYTATVVVQLHPLFTTKVDRAYKLRCFYKEAEKAV--GAEVSV-SDPTPVQLED---ESPQPV 150

  Fly   503 MRITSRDGS---DMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNSEIT--LIDSNGC 562
            ...|....|   .:.:.|::||.|...:|     .|.|.:..|:...|.|...|.:  :|..|||
 Worm   151 CSYTIHKESPNGPIAKFAQLGDVLYHVWE-----CPSEAYQMEVYNCDVVGGEEYSKKVIGENGC 210

  Fly   563 PTDHFIM-GPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPC--------MPSCEPVQCEQE 618
            ..|.:|| ..||..:.:...:.||  ||.||....|:....::.|        .|.|:......:
 Worm   211 SEDIYIMPNLIYNENRTKAFVNSN--AFNFPDQNNVRISCKISVCPTLSGTCHQPKCDASASSID 273

  Fly   619 DTSGEFRSLLSYGRK--RRSLNTTDDHPRPRRDIDTSKKSAPS 659
            |.|...      ||:  |..|.||   |.|     ||....||
 Worm   274 DASEPI------GRELARDELITT---PMP-----TSSTEIPS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635
ZP 381..615 CDD:214579 67/254 (26%)
cutl-16NP_495296.2 ZP 35..268 CDD:214579 67/251 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.