DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-16

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_495296.2 Gene:cutl-16 / 174065 WormBaseID:WBGene00019426 Length:488 Species:Caenorhabditis elegans


Alignment Length:303 Identity:81/303 - (26%)
Similarity:116/303 - (38%) Gaps:56/303 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IECGGGDMLARIRTSKLFNGKVYAKG--SPKSCSVDVKSALDFELRMNYHDLECNV-RQSTAG-- 439
            :.|..|.|..::.|.|.....|:.||  ....||....:...||..      :|:| ||..|.  
 Worm    33 VSCHSGFMSLKVNTEKSPPSHVFVKGHFRKDGCSFSNTANATFEFS------KCDVMRQREANPK 91

  Fly   440 --RYVNDIIIQHHDMIVTSSDLGLALACQYDLTNKSVSNGVDLDVRGDIMPALSEEVIVESPNVI 502
              .|...:::|.|.:..|..|....|.|.|....|:|  |.::.| .|..|...|:   |||..:
 Worm    92 GMAYTATVVVQLHPLFTTKVDRAYKLRCFYKEAEKAV--GAEVSV-SDPTPVQLED---ESPQPV 150

  Fly   503 MRITSRDGS---DMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNSEIT--LIDSNGC 562
            ...|....|   .:.:.|::||.|...:|     .|.|.:..|:...|.|...|.:  :|..|||
 Worm   151 CSYTIHKESPNGPIAKFAQLGDVLYHVWE-----CPSEAYQMEVYNCDVVGGEEYSKKVIGENGC 210

  Fly   563 PTDHFIM-GPIYKGSVSGKMLLSNFDAFKFPSSEVVQFRALVTPC--------MPSCEPVQCEQE 618
            ..|.:|| ..||..:.:...:.||  ||.||....|:....::.|        .|.|:......:
 Worm   211 SEDIYIMPNLIYNENRTKAFVNSN--AFNFPDQNNVRISCKISVCPTLSGTCHQPKCDASASSID 273

  Fly   619 DTSGEFRSLLSYGRK--RRSLNTTDDHPRPRRDIDTSKKSAPS 659
            |.|...      ||:  |..|.||   |.|     ||....||
 Worm   274 DASEPI------GRELARDELITT---PMP-----TSSTEIPS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 67/254 (26%)
cutl-16NP_495296.2 ZP 35..268 CDD:214579 67/251 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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