DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and Matn3

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_034900.4 Gene:Matn3 / 17182 MGIID:1328350 Length:481 Species:Mus musculus


Alignment Length:434 Identity:84/434 - (19%)
Similarity:142/434 - (32%) Gaps:158/434 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LALMLYSAATAKEHLRIR--------RQAAESVTAAAPNASKVMASEEIKDK--TEWPGAKETST 66
            :|::.| |:|.|...::.        :||...:|..:......:|.:...::  |...||:...:
Mouse   117 VAVVNY-ASTVKIEFQLNTYSDKQALKQAVARITPLSTGTMSGLAIQTAMEEAFTVEAGARGPMS 180

  Fly    67 EINRTE------RPVENV-----ETRNSGFDLPAA----SDLSS--SLGSE--EDSIYYDNAPVD 112
            .|.:..      ||.:.|     ..|.||.:|.|.    :|:.|  .:.|:  |:.::|..    
Mouse   181 NIPKVAIIVTDGRPQDQVNEVAARARASGIELYAVGVDRADMESLKMMASKPLEEHVFYVE---- 241

  Fly   113 CNPELVGFEIVTGYVFSAPEKLMDSQPGTLMLTDC-LDTCR-KNKTCQSVNYETGLCVL---FSA 172
                          .:...|||    ......|.| ||.|. ....||.|      ||.   ...
Mouse   242 --------------TYGVIEKL----SARFQETFCALDQCMLGTHQCQHV------CVSDGDGKH 282

  Fly   173 HADQLPGALTKSQFPVFTIYAQ-KSCLAVKPCSRAWYVDRVQNYKLKTEVKRTVSVASRRECFEL 236
            |.:...|         :|:.|. |:|.|:..|:                       .|...|.::
Mouse   283 HCECSQG---------YTLNADGKTCSAIDKCA-----------------------LSTHGCEQI 315

  Fly   237 CLGEND--FTCR-----SANYDRTSGACELSELDRLTLA--GSQAFQVNDGS-----DYLENHCV 287
            |:.:.:  :.|.     :.|.||.:.|.    ||:....  |.|...||||:     :..|.:.:
Mouse   316 CVNDRNGSYHCECYGGYALNADRRTCAA----LDKCASGTHGCQHICVNDGAGSHHCECFEGYTL 376

  Fly   288 DEPNKLCEFKRLPGRILKTVDSVYQEVS-SIDECRELCLNS---PYRCH---SYDYNDTGDMVCR 345
            :...|.|              ||..:.: ....|:.:|::.   .|.|.   .|..||       
Mouse   377 NADKKTC--------------SVRNKCALGTHGCQHICVSDGAVAYHCDCFPGYTLND------- 420

  Fly   346 LSHHSRATLADVQEPFLEVPEASTYELTSCYNVTIECGGGDMLA 389
                .:.|.:|::            |..|..::...||.|..||
Mouse   421 ----DKKTCSDIE------------EARSLISIEDACGCGATLA 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453 18/82 (22%)
PAN_AP_HGF 211..285 CDD:238532 17/87 (20%)
PAN_1 294..373 CDD:278453 13/85 (15%)
ZP 381..615 CDD:214579 5/9 (56%)
Matn3NP_034900.4 vWFA 75..298 CDD:294047 43/218 (20%)
FXa_inhibition 305..341 CDD:291342 8/58 (14%)
FXa_inhibition 347..383 CDD:291342 8/35 (23%)
FXa_inhibition 389..425 CDD:291342 7/46 (15%)
Matrilin_ccoil 438..478 CDD:287378 5/11 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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